Evaluation of total hepatocellular cancer lifespan, including both clinically evident and preclinical development, using combined network phenotyping strategy and fisher information analysis.

Petr Pančoška, Lubomír Skála, Jaroslav Nešetřil, Brian I Carr
Author Information
  1. Petr Pančoška: Department of Medicine and Center for Craniofacial and Dental Genetics, University of Pittsburgh, Pittsburgh, PA; Computer Science Institute (IUUK) of Charles University Prague, Czech Republic.
  2. Lubomír Skála: Department of Chemical Physics and Optics, Faculty of Mathematics and Physics, Charles University Prague, Czech Republic.
  3. Jaroslav Nešetřil: Computer Science Institute (IUUK) of Charles University Prague, Czech Republic.
  4. Brian I Carr: Department of Gastroenterology and Liver Diseases Tel-Aviv Sourasky Medical Center Tel Aviv, Israel. Electronic address: brianicarr@hotmail.com.

Abstract

We previously showed that for hepatocellular cancer (HCC) prognostication, disease parameters need to be considered within a total personal clinical context. This requires preserving the coherence of data values, observed simultaneously for each patient during baseline diagnostic evaluation. Application of the Network Phenotyping Strategy (NPS) provided quantitative descriptors of these patient coherences. Combination of these descriptors with Fisher information about the patient tumor mass and the histogram of the tumor masses in the whole cohort permitted estimation of the time from disease onset until clinical diagnosis (t(baseline)). We found faster growth of smaller tumors having total masses<70 (80% of cohort) which involved about three times more interacting cellular processes than were observed for slower growing larger tumors (20% of cohort) with total masses>70. Combining the clinical survival and t(baseline) normalized all HCC patients to a common 1,045 days of mean total disease duration (t(baseline) plus post diagnosis survival). We also found a simple relationship between the baseline clinical status, t(baseline), and survival. Every difference between individual patient baseline clinical profiles and special coherent clinical status (HL1) reduced the above common overall survival (OVS) by 65 days. In summary, we showed that HCC patients with any given tumor can best have their tumor biology understood, when account is taken of the total clinical and liver contexts, and with knowing the point in the tumor history when an HCC diagnosis is made. This ability to compute the t(baseline) from standard clinical data brings us closer to calculating survival from diagnosis of individual HCC patients.

References

  1. Ann Surg Oncol. 2008 Dec;15(12):3503-11 [PMID: 18777193]
  2. Semin Oncol. 2014 Jun;41(3):406-414 [PMID: 25023357]
  3. World J Surg. 2007 Jun;31(6):1243-8 [PMID: 17440771]
  4. Int J Mol Sci. 2014 May 27;15(6):9422-58 [PMID: 24871369]
  5. J Gastrointest Dig Syst. 2013 Mar 2;Suppl 12: [PMID: 23956952]
  6. Hepatogastroenterology. 2013 Sep;60(126):1433-7 [PMID: 23933936]
  7. Semin Cancer Biol. 2015 Feb;30:60-9 [PMID: 24657638]
  8. Growth Dev Aging. 1989 Spring-Summer;53(1-2):25-33 [PMID: 2807642]
  9. CPT Pharmacometrics Syst Pharmacol. 2014 May 07;3:e113 [PMID: 24806032]
  10. Semin Cancer Biol. 2015 Feb;30:70-8 [PMID: 24793698]
  11. Int J Surg. 2013;11(10):1078-82 [PMID: 24129124]
  12. PLoS One. 2014 Aug 18;9(8):e103228 [PMID: 25133493]
  13. PLoS One. 2014 Mar 07;9(3):e88182 [PMID: 24609114]
  14. BMC Gastroenterol. 2012 Jun 08;12:64 [PMID: 22681852]
  15. Oncology. 2012;83(6):339-45 [PMID: 23006937]
  16. Hepatol Int. 2009 Dec 24;4(1):396-405 [PMID: 20305756]
  17. Semin Oncol. 2010 Apr;37(2):170-81 [PMID: 20494709]
  18. Hepatology. 2015 Jan;61(1):191-9 [PMID: 25142309]
  19. Hepatogastroenterology. 2003 Nov-Dec;50(54):2022-7 [PMID: 14696457]
  20. Radiat Environ Biophys. 1987;26(2):125-41 [PMID: 3615807]
  21. Cancer. 2009 Jul 1;115(13):2844-52 [PMID: 19402168]
  22. J Clin Pathol. 1987 Sep;40(9):1055-63 [PMID: 3312299]
  23. Gastroenterology. 2013 Mar;144(3):512-27 [PMID: 23313965]

Grants

  1. R01 CA082723/NCI NIH HHS
  2. CA 82723/NCI NIH HHS

MeSH Term

Adult
Aged
Carcinoma, Hepatocellular
Female
Humans
Liver Neoplasms
Male
Middle Aged
Models, Theoretical
Prognosis

Word Cloud

Created with Highcharts 10.0.0clinicalbaselinetotalHCCtumortsurvivalpatientdiagnosisdiseasecohortpatientsshowedhepatocellularcancerdataobserveddescriptorsinformationfoundtumorscommondaysstatusindividualpreviouslyprognosticationparametersneedconsideredwithinpersonalcontextrequirespreservingcoherencevaluessimultaneouslydiagnosticevaluationApplicationNetworkPhenotypingStrategyNPSprovidedquantitativecoherencesCombinationFishermasshistogrammasseswholepermittedestimationtimeonsetfastergrowthsmallermasses<7080%involvedthreetimesinteractingcellularprocessesslowergrowinglarger20%masses>70Combiningnormalized1045meandurationpluspostalsosimplerelationshipEverydifferenceprofilesspecialcoherentHL1reducedoverallOVS65summarygivencanbestbiologyunderstoodaccounttakenlivercontextsknowingpointhistorymadeabilitycomputestandardbringsusclosercalculatingEvaluationlifespanincludingclinicallyevidentpreclinicaldevelopmentusingcombinednetworkphenotypingstrategyfisheranalysis

Similar Articles

Cited By (1)