Role of the RAD51-SWI5-SFR1 Ensemble in homologous recombination.

Guan-Chin Su, Hsin-Yi Yeh, Sheng-Wei Lin, Chan-I Chung, Yu-Shan Huang, Yi-Chung Liu, Ping-Chiang Lyu, Peter Chi
Author Information
  1. Guan-Chin Su: Institute of Biochemical Sciences, National Taiwan University, No. 1, Section 4, Roosevelt Road, Taipei 10617, Taiwan.
  2. Hsin-Yi Yeh: Institute of Biochemical Sciences, National Taiwan University, No. 1, Section 4, Roosevelt Road, Taipei 10617, Taiwan.
  3. Sheng-Wei Lin: Institute of Biological Chemistry, Academia Sinica, 128 Academia Road, Section 2, Nankang, Taipei 11529, Taiwan.
  4. Chan-I Chung: Institute of Biological Chemistry, Academia Sinica, 128 Academia Road, Section 2, Nankang, Taipei 11529, Taiwan.
  5. Yu-Shan Huang: National Synchrotron Radiation Research Center, No.101, Hsin-Ann Road, Hsinchu, Science Park, Hsinchu 30076, Taiwan.
  6. Yi-Chung Liu: Institute of Population Sciences, National Health Research Institutes, NO. 35 Keyan, Road, Zhunan, Miaoli County 35053, Taiwan.
  7. Ping-Chiang Lyu: Institute of Bioinformatics and Structural Biology, National Tsing-Hua University, No. 101, Section 2, Kuang-Fu Road, Hsinchu 30013, Taiwan.
  8. Peter Chi: Institute of Biochemical Sciences, National Taiwan University, No. 1, Section 4, Roosevelt Road, Taipei 10617, Taiwan Institute of Biological Chemistry, Academia Sinica, 128 Academia Road, Section 2, Nankang, Taipei 11529, Taiwan peterhchi@ntu.edu.tw.

Abstract

During DNA double-strand break and replication fork repair by homologous recombination, the RAD51 recombinase catalyzes the DNA strand exchange reaction via a helical polymer assembled on single-stranded DNA, termed the presynaptic filament. Our published work has demonstrated a dual function of the SWI5-SFR1 complex in RAD51-mediated DNA strand exchange, namely, by stabilizing the presynaptic filament and maintaining the catalytically active ATP-bound state of the filament via enhancement of ADP release. In this study, we have strived to determine the basis for physical and functional interactions between Mus musculus SWI5-SFR1 and RAD51. We found that SWI5-SFR1 preferentially associates with the oligomeric form of RAD51. Specifically, a C-terminal domain within SWI5 contributes to RAD51 interaction. With specific RAD51 interaction defective mutants of SWI5-SFR1 that we have isolated, we show that the physical interaction is indispensable for the stimulation of the recombinase activity of RAD51. Our results thus help establish the functional relevance of the trimeric RAD51-SWI5-SFR1 complex and provide insights into the mechanistic underpinnings of homology-directed DNA repair in mammalian cells.

References

  1. Cold Spring Harb Perspect Biol. 2015 Nov 02;7(11):null [PMID: 26525148]
  2. Mol Cell. 2007 Nov 9;28(3):482-90 [PMID: 17996711]
  3. Mol Cell. 2001 Feb;7(2):273-82 [PMID: 11239456]
  4. J Biol Chem. 2011 Mar 18;286(11):9888-93 [PMID: 21252223]
  5. Oncogene. 2002 Dec 16;21(58):8981-93 [PMID: 12483514]
  6. J Biol Chem. 2011 Dec 16;286(50):43569-76 [PMID: 22033972]
  7. Science. 2014 Mar 28;343(6178):1470-5 [PMID: 24675954]
  8. Nature. 2010 Oct 7;467(7316):678-83 [PMID: 20729832]
  9. Nat Struct Mol Biol. 2007 Jun;14(6):475-83 [PMID: 17515903]
  10. Crit Rev Biochem Mol Biol. 2011 Jun;46(3):240-70 [PMID: 21599536]
  11. EMBO J. 2003 Sep 1;22(17):4566-76 [PMID: 12941707]
  12. Proc Natl Acad Sci U S A. 2003 Dec 23;100(26):15770-5 [PMID: 14663140]
  13. Nucleic Acids Res. 2014 Jan;42(1):349-58 [PMID: 24078249]
  14. Cold Spring Harb Perspect Biol. 2014 Aug 07;6(9):a016428 [PMID: 25104768]
  15. Cell. 1996 Nov 15;87(4):757-66 [PMID: 8929543]
  16. Annu Rev Biochem. 2008;77:229-57 [PMID: 18275380]
  17. Nat Struct Mol Biol. 2010 Oct;17(10):1260-2 [PMID: 20729859]
  18. Nature. 2002 Nov 21;420(6913):287-93 [PMID: 12442171]
  19. PLoS Genet. 2010 Oct 14;6(10):e1001160 [PMID: 20976249]
  20. Nucleic Acids Res. 2012 Aug;40(14):6558-69 [PMID: 22492707]
  21. Cancer Res. 1999 Aug 1;59(15):3547-51 [PMID: 10446958]
  22. Nat Struct Mol Biol. 2007 Jun;14(6):468-74 [PMID: 17515904]
  23. Mol Cell. 2003 Oct;12(4):1029-41 [PMID: 14580352]
  24. Nat Rev Mol Cell Biol. 2006 Oct;7(10):739-50 [PMID: 16926856]
  25. Oncogene. 2002 Jul 25;21(32):5002-5 [PMID: 12118380]
  26. Cold Spring Harb Perspect Biol. 2015 Apr 01;7(4):a016600 [PMID: 25833843]
  27. Structure. 2012 Mar 7;20(3):440-9 [PMID: 22405003]
  28. Cold Spring Harb Perspect Biol. 2015 Aug 03;7(8):a016501 [PMID: 26238353]
  29. EMBO J. 2007 Mar 7;26(5):1352-62 [PMID: 17304215]
  30. Mol Cell. 2015 Jul 16;59(2):176-87 [PMID: 26145171]
  31. Cold Spring Harb Perspect Biol. 2014 Oct 09;6(12):a016451 [PMID: 25301930]
  32. Nat Struct Mol Biol. 2006 Sep;13(9):823-30 [PMID: 16921379]
  33. Nat Struct Mol Biol. 2010 Oct;17(10):1263-5 [PMID: 20729858]
  34. Mol Cell. 2007 Nov 9;28(3):468-81 [PMID: 17996710]
  35. J Biol Chem. 2006 Apr 28;281(17):11649-57 [PMID: 16513631]

MeSH Term

Adenosine Triphosphate
Animals
DNA Breaks, Double-Stranded
DNA Repair
DNA Replication
DNA-Binding Proteins
Homologous Recombination
Mice
Multiprotein Complexes
Nuclear Proteins
Rad51 Recombinase

Chemicals

DNA-Binding Proteins
Multiprotein Complexes
Nuclear Proteins
Sfr1 protein, mouse
Swi5 protein, mouse
Adenosine Triphosphate
Rad51 Recombinase

Word Cloud

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