Small GTPase proteins in macroautophagy.

Shu Yang, Anne Rosenwald
Author Information
  1. Shu Yang: a Department of Biology , Georgetown University , Washington, DC , USA.
  2. Anne Rosenwald: a Department of Biology , Georgetown University , Washington, DC , USA. ORCID

Abstract

Macroautophagy, a highly conserved process in eukaryotic cells, is initiated in response to stress, especially nutrient starvation. Macroautophagy helps cells survive by engulfing proteins and organelles into an unusual double-membraned structure called the autophagosome, which then fuses with the lysosome. Upon degradation of the engulfed contents, the building blocks are recycled for synthesis of new macromolecules. Recent work has demonstrated that construction of the autophagosome requires a variety of small GTPases in variations of their normal roles in membrane traffic. In this Commentary, we review our own recent findings with respect to 2 different GTPases, Arl1, a member of the Arf/Arl/Sar family, and Ypt6, a member of the Rab family, in the yeast S. cerevisiae in light of other information from the literature and discuss future directions for further discerning the roles of small GTPases in autophagy.

Keywords

References

  1. EMBO J. 2016 Feb 1;35(3):281-301 [PMID: 26711178]
  2. Autophagy. 2015;11(9):1652-67 [PMID: 26103419]
  3. Trends Cell Biol. 2000 Feb;10(2):60-7 [PMID: 10652516]
  4. G3 (Bethesda). 2011 Jun;1(1):43-56 [PMID: 22384317]
  5. Nat Rev Mol Cell Biol. 2007 Nov;8(11):931-7 [PMID: 17712358]
  6. Front Cell Dev Biol. 2016 Mar 30;4:20 [PMID: 27066478]
  7. BMC Vet Res. 2015 May 06;11:103 [PMID: 25944062]
  8. Eur J Cell Biol. 2010 Nov;89(11):780-7 [PMID: 20709422]
  9. Genes Dev. 2007 Nov 15;21(22):2861-73 [PMID: 18006683]
  10. Traffic. 2014 Mar;15(3):327-37 [PMID: 24329977]
  11. J Biol Chem. 2004 May 14;279(20):20663-71 [PMID: 15016820]
  12. Int J Mol Sci. 2014 Oct 09;15(10):18084-101 [PMID: 25302616]
  13. Proc Natl Acad Sci U S A. 2016 Mar 22;113(12):E1683-90 [PMID: 26966233]
  14. Methods Mol Biol. 2015 ;1298:107-16 [PMID: 25800836]
  15. J Cell Biol. 2001 Aug 6;154(3):549-71 [PMID: 11489916]
  16. Autophagy. 2014;10(12):2297-309 [PMID: 25495476]
  17. J Cell Sci. 2013 Mar 1;126(Pt 5):1059-69 [PMID: 23620509]
  18. Science. 2010 Jan 22;327(5964):425-31 [PMID: 20093466]
  19. FEBS Lett. 2015 Nov 14;589(22):3343-53 [PMID: 26450776]
  20. Autophagy. 2014 Jul;10 (7):1154-66 [PMID: 24915298]
  21. Proc Natl Acad Sci U S A. 2010 Apr 27;107(17 ):7811-6 [PMID: 20375281]
  22. Nat Rev Mol Cell Biol. 2010 Nov;11(11):759-63 [PMID: 20966969]
  23. Autophagy. 2015 ;11(12 ):2393-7 [PMID: 26565612]
  24. J Biochem. 2004 Dec;136(6):761-7 [PMID: 15671486]
  25. Curr Biol. 2012 Jan 10;22(1):R29-34 [PMID: 22240478]
  26. Trends Cell Biol. 2004 Dec;14(12):687-94 [PMID: 15564045]
  27. Curr Biol. 2003 Mar 4;13(5):405-10 [PMID: 12620189]
  28. Cell Biol Int. 2011 Apr;35(4):311-9 [PMID: 21155714]
  29. Methods Enzymol. 2008;451:33-42 [PMID: 19185711]
  30. Cell Rep. 2015 Oct 6;13(1):1-7 [PMID: 26387955]
  31. Methods Enzymol. 2005;403:599-607 [PMID: 16473623]
  32. EMBO Rep. 2015 Jun;16(6):709-18 [PMID: 25925668]
  33. Autophagy. 2016 Oct 2;12 (10 ):1721-1737 [PMID: 27462928]
  34. J Cell Sci. 2006 Jul 15;119(Pt 14):2903-11 [PMID: 16787937]
  35. FEMS Yeast Res. 2012 May;12(3):332-40 [PMID: 22188384]
  36. J Cell Sci. 2015 Jul 1;128(13):2278-92 [PMID: 25999476]
  37. Cell Death Differ. 2002 Feb;9(2):158-68 [PMID: 11840166]
  38. J Cell Sci. 2004 May 1;117(Pt 11):2309-20 [PMID: 15126631]
  39. Proc Natl Acad Sci U S A. 2013 Jun 11;110(24):9800-5 [PMID: 23716696]
  40. Sci Signal. 2013 May 28;6(277):ra42 [PMID: 23716719]
  41. FEMS Yeast Res. 2012 Sep;12(6):637-50 [PMID: 22594927]
  42. Cell Death Differ. 2014 Mar;21(3):348-58 [PMID: 24440914]
  43. Nat Methods. 2009 Dec;6(12 ):917-22 [PMID: 19915560]
  44. Biochem Soc Trans. 2005 Aug;33(Pt 4):601-5 [PMID: 16042553]
  45. Autophagy. 2011 Dec;7(12 ):1546-50 [PMID: 22108003]
  46. Autophagy. 2016 May 3;12 (5):894-5 [PMID: 26986547]
  47. Cell Cycle. 2015 ;14 (17 ):2717-8 [PMID: 26177209]
  48. Biochem Soc Trans. 2015 Feb;43(1):92-6 [PMID: 25619251]
  49. Traffic. 2013 Feb;14 (2):233-46 [PMID: 23078654]
  50. Cell. 2011 Jul 22;146(2):290-302 [PMID: 21784249]

MeSH Term

Animals
Autophagy
GTP Phosphohydrolases
Saccharomyces cerevisiae

Chemicals

GTP Phosphohydrolases

Word Cloud

Created with Highcharts 10.0.0autophagosomeGTPasesMacroautophagycellsproteinssmallrolesmembranetrafficArl1memberfamilyYpt6cerevisiaemacroautophagyhighlyconservedprocesseukaryoticinitiatedresponsestressespeciallynutrientstarvationhelpssurviveengulfingorganellesunusualdouble-membranedstructurecalledfuseslysosomeUpondegradationengulfedcontentsbuildingblocksrecycledsynthesisnewmacromoleculesRecentworkdemonstratedconstructionrequiresvarietyvariationsnormalCommentaryreviewrecentfindingsrespect2differentArf/Arl/SarRabyeastSlightinformationliteraturediscussfuturedirectionsdiscerningautophagySmallGTPaseGTPase-activatingproteinGAPSaccharomycesguaninenucleotideexchangefactorGEF

Similar Articles

Cited By