An efficient basket trial design.

Kristen M Cunanan, Alexia Iasonos, Ronglai Shen, Colin B Begg, Mithat Gönen
Author Information
  1. Kristen M Cunanan: Department of Epidemiology and Biostatistics, Memorial Sloan Kettering Cancer Center, 485 Lexington Ave. 2nd Floor, New York City, 10017, NY, U.S.A.
  2. Alexia Iasonos: Department of Epidemiology and Biostatistics, Memorial Sloan Kettering Cancer Center, 485 Lexington Ave. 2nd Floor, New York City, 10017, NY, U.S.A.
  3. Ronglai Shen: Department of Epidemiology and Biostatistics, Memorial Sloan Kettering Cancer Center, 485 Lexington Ave. 2nd Floor, New York City, 10017, NY, U.S.A.
  4. Colin B Begg: Department of Epidemiology and Biostatistics, Memorial Sloan Kettering Cancer Center, 485 Lexington Ave. 2nd Floor, New York City, 10017, NY, U.S.A.
  5. Mithat Gönen: Department of Epidemiology and Biostatistics, Memorial Sloan Kettering Cancer Center, 485 Lexington Ave. 2nd Floor, New York City, 10017, NY, U.S.A.

Abstract

The landscape for early phase cancer clinical trials is changing dramatically because of the advent of targeted therapy. Increasingly, new drugs are designed to work against a target such as the presence of a specific tumor mutation. Because typically only a small proportion of cancer patients will possess the mutational target, but the mutation is present in many different cancers, a new class of basket trials is emerging, whereby the drug is tested simultaneously in different baskets, that is, subgroups of different tumor types. Investigators desire not only to test whether the drug works but also to determine which types of tumors are sensitive to the drug. A natural strategy is to conduct parallel trials, with the drug 's effectiveness being tested separately, using for example, the popular Simon two-stage design independently in each basket. The work presented is motivated by the premise that the efficiency of this strategy can be improved by assessing the homogeneity of the baskets ' response rates at an interim analysis and aggregating the baskets in the second stage if the results suggest the drug might be effective in all or most baskets. Via simulations, we assess the relative efficiencies of the two strategies. Because the operating characteristics depend on how many tumor types are sensitive to the drug, there is no uniformly efficient strategy. However, our investigation demonstrates that substantial efficiencies are possible if the drug works in most or all baskets, at the cost of modest losses of power if the drug works in only a single basket. Copyright © 2017 John Wiley & Sons, Ltd.

Keywords

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Grants

  1. P01 CA129243/NCI NIH HHS
  2. P30 CA008748/NCI NIH HHS
  3. R01 CA163251/NCI NIH HHS

MeSH Term

Antineoplastic Agents
Biostatistics
Clinical Trials as Topic
Clinical Trials, Phase II as Topic
Computer Simulation
Humans
Molecular Targeted Therapy
Mutation
Neoplasms
Software

Chemicals

Antineoplastic Agents

Word Cloud

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