Cloning and Aggregation Characterization of Rubber Elongation Factor and Small Rubber Particle Protein from Ficus carica.

Saki Yokota, Yurina Suzuki, Keisuke Saitoh, Sakihito Kitajima, Norimasa Ohya, Takeshi Gotoh
Author Information
  1. Saki Yokota: Department of Materials Science, Applied Chemistry Course, Graduate School of Engineering Science, Akita University, 1-1 Tegatagakuen-machi, Akita City, Akita, 010-8502, Japan.
  2. Yurina Suzuki: Department of Engineering in Applied Chemistry, Faculty of Engineering and Resource Science, Akita University, Akita, 010-8502, Japan.
  3. Keisuke Saitoh: Department of Engineering in Applied Chemistry, Faculty of Engineering and Resource Science, Akita University, Akita, 010-8502, Japan.
  4. Sakihito Kitajima: Department of Applied Biology, Kyoto Institute of Technology, Kyoto, 606-8585, Japan.
  5. Norimasa Ohya: Department of Material and Biological Chemistry, Faculty of Science, Yamagata University, Yamagata, 990-8560, Japan.
  6. Takeshi Gotoh: Department of Materials Science, Applied Chemistry Course, Graduate School of Engineering Science, Akita University, 1-1 Tegatagakuen-machi, Akita City, Akita, 010-8502, Japan. tgotoh@gipc.akita-u.ac.jp. ORCID

Abstract

Rubber elongation factor (REF) and small rubber particle protein (SRPP) are major latex proteins harvested from Hevea brasiliensis (the rubber tree; HbREF and HbSRPP, respectively). Their amino acid sequences exhibit high homology with each other. In the present study, we cloned two cDNAs encoding REF/SRPP-family proteins (FcREF/SRPP-1 and -2) from the laticifers of Ficus carica (fig tree). The amino acid sequences of these proteins showed high homology not only with each other but also with HbREF and HbSRPP. Recombinant FcREF/SRPP-1 and -2 were expressed in E. coli, and their aggregation properties were examined using a Congo red binding assay, agarose gel electrophoresis, and transmission electron microscopy. FcREF/SRPP-1 formed fibrils when incubated in PBS, and grew to micrometer-sized amorphous aggregates that precipitated rapidly. These aggregation properties of FcREF/SRPP-1 are quite similar to those of HbREF, although the growth rate and size of FcREF/SRPP-1 aggregates were inferior to those of HbREF. FcREF/SRPP-2 also formed aggregates during the incubation, but they did not precipitate, as has been reported for HbSRPP. Our results suggest that FcREF/SRPP-1 and -2 correspond to HbREF and HbSRPP, respectively. These aggregation properties could provide useful benchmarks for classifying REF/SRPP-family proteins as REF or SRPP.

Keywords

References

  1. J Neurosci. 2010 Mar 31;30(13):4528-35 [PMID: 20357103]
  2. J Neurosci. 2009 Apr 22;29(16):5153-62 [PMID: 19386911]
  3. Sci Rep. 2017 Jan 25;7:41124 [PMID: 28120935]
  4. J Biol Chem. 1999 Jun 11;274(24):17132-8 [PMID: 10358068]
  5. Sci Rep. 2015 Sep 08;5:13778 [PMID: 26348427]
  6. Sci Rep. 2016 Jun 24;6:28594 [PMID: 27339202]
  7. PLoS One. 2012;7(7):e41874 [PMID: 22911861]
  8. Plant J. 2015 May;82(4):609-20 [PMID: 25809497]
  9. PLoS One. 2012;7(10):e48065 [PMID: 23133547]
  10. Biochim Biophys Acta. 2014 Feb;1844(2):473-85 [PMID: 24239687]
  11. Plant Physiol. 2016 Apr;170(4):2494-510 [PMID: 26903535]
  12. Plant Cell Physiol. 2002 Nov;43(11):1323-33 [PMID: 12461132]
  13. J Biol Chem. 1989 Nov 5;264(31):18608-17 [PMID: 2681199]
  14. FEBS Lett. 1995 Apr 24;363(3):211-3 [PMID: 7737403]
  15. Plant Physiol. 2000 Jul;123(3):1133-42 [PMID: 10889262]
  16. J Biol Chem. 2004 Apr 23;279(17):17490-9 [PMID: 14752113]
  17. Science. 2006 Sep 15;313(5793):1596-604 [PMID: 16973872]
  18. Biochimie. 2014 Nov;106:1-9 [PMID: 25019490]
  19. Appl Microbiol Biotechnol. 2000 Apr;53(4):355-65 [PMID: 10803889]
  20. Plant Physiol. 1991 Sep;97(1):317-21 [PMID: 16668388]
  21. Phytochemistry. 2012 Jul;79:46-56 [PMID: 22609069]
  22. Genom Data. 2017 Jul 05;13:64-66 [PMID: 28736702]
  23. Biochim Biophys Acta. 2016 Apr;1864(4):388-99 [PMID: 26805576]
  24. Phytochemistry. 2015 May;113:121-9 [PMID: 25553584]
  25. Phytochemistry. 2008 Mar;69(5):1111-8 [PMID: 18226821]
  26. Elife. 2016 Oct 28;5: [PMID: 27790974]
  27. Proc Natl Acad Sci U S A. 2005 Apr 26;102(17):6098-102 [PMID: 15829582]
  28. Int J Mol Sci. 2017 May 02;18(5):null [PMID: 28468331]
  29. Nat Plants. 2016 May 23;2(6):16073 [PMID: 27255837]

Grants

  1. 16K06865/Japan Society for the Promotion of Science

MeSH Term

Amino Acid Sequence
Antigens, Plant
Cloning, Molecular
Escherichia coli
Ficus
Gene Expression
Genetic Vectors
Hevea
Microspheres
Plant Proteins
Protein Aggregates
Recombinant Proteins
Rubber
Sequence Alignment
Sequence Homology, Amino Acid

Chemicals

Antigens, Plant
Plant Proteins
Protein Aggregates
Recombinant Proteins
SRPP protein, Hevea brasiliensis
REF protein, Hevea brasiliensis
Rubber

Word Cloud

Created with Highcharts 10.0.0FcREF/SRPP-1proteinsHbREFHbSRPPaggregationRubberREFrubberSRPP-2propertiesaggregateslatexHeveabrasiliensistreerespectivelyaminoacidsequenceshighhomologyREF/SRPP-familyFicuscaricaalsoformedProteinelongationfactorsmallparticleproteinmajorharvestedexhibitpresentstudyclonedtwocDNAsencodinglaticifersfigshowedRecombinantexpressedEcoliexaminedusingCongoredbindingassayagarosegelelectrophoresistransmissionelectronmicroscopyfibrilsincubatedPBSgrewmicrometer-sizedamorphousprecipitatedrapidlyquitesimilaralthoughgrowthratesizeinferiorFcREF/SRPP-2incubationprecipitatereportedresultssuggestcorrespondprovideusefulbenchmarksclassifyingCloningAggregationCharacterizationElongationFactorSmallParticleNatural

Similar Articles

Cited By