Rapid molecular assays for detection of tuberculosis.

Rkia Eddabra, Hassan Ait Benhassou
Author Information
  1. Rkia Eddabra: Higher Institute of Nursing Professions and Health Techniques, Avenue Colonnel Major Habbouha Oueld Laâbid. Madinat Al Wahda I, Laayoune, Morocco.
  2. Hassan Ait Benhassou: Medical Biotechnology Center, Moroccan Foundation for Advanced Science, Innovation and Research (MAScIR), Rabat Design Center, Avenue Mohamed El Jazouli - Madinat Al Irfane, 10100 Rabat, Morocco.

Abstract

Tuberculosis (TB) is an infectious disease that remains an important public health problem at the global level. It is one of the main causes of morbidity and mortality, due to the emergence of antibiotic resistant strains and HIV co-infection. Over the past decade, important progress has been made for better control of the disease. While microscopy and culture continue to be indispensible for laboratory diagnosis of tuberculosis, the range of several molecular diagnostic tests, including the nucleic acid amplification test (NAAT) and whole-genome sequencing (WGS), have expanded tremendously. They are becoming more accessible not only for detection and identification of complex in clinical specimens, but now extend to diagnosing multi-drug resistant strains. Molecular diagnostic tests provide timely results useful for high-quality patient care, low contamination risk, and ease of performance and speed. This review focuses on the current diagnostic tests in use, including emerging technologies used for detection of tuberculosis in clinical specimens. The sensitivity and specificity of these tests have also been taken into consideration.

Keywords

References

  1. J Clin Microbiol. 2012 Nov;50(11):3712-6 [PMID: 22972826]
  2. Microbiol Res. 2010 Mar 31;165(3):211-20 [PMID: 19515543]
  3. BMC Infect Dis. 2014 Feb 05;14:59 [PMID: 24498967]
  4. mBio. 2017 Aug 29;8(4): [PMID: 28851844]
  5. Clin Infect Dis. 2016 Apr 15;62(8):995-1001 [PMID: 26908793]
  6. Nucleic Acids Res. 2000 Jun 15;28(12):E63 [PMID: 10871386]
  7. J Clin Microbiol. 2014 Aug;52(8):2913-24 [PMID: 24899018]
  8. Cochrane Database Syst Rev. 2014 Jan 21;(1):CD009593 [PMID: 24448973]
  9. J Infect. 2017 May;74(5):466-472 [PMID: 28237624]
  10. N Engl J Med. 2010 Sep 9;363(11):1005-15 [PMID: 20825313]
  11. N Engl J Med. 2015 Mar 19;372(12):1181-2 [PMID: 25785984]
  12. J Clin Microbiol. 2002 May;40(5):1723-7 [PMID: 11980950]
  13. J Clin Microbiol. 2013 Oct;51(10):3225-7 [PMID: 23863563]
  14. Sci Rep. 2015 Dec 09;5:18113 [PMID: 26648113]
  15. Indian J Med Res. 2010 Jul;132:100-2 [PMID: 20693598]
  16. J Clin Microbiol. 2014 Jul;52(7):2662-4 [PMID: 24789191]
  17. J Clin Microbiol. 2009 Aug;47(8):2520-4 [PMID: 19494067]
  18. J Clin Microbiol. 2015 Apr;53(4):1342-4 [PMID: 25609720]
  19. Am J Respir Crit Care Med. 2008 Apr 1;177(7):787-92 [PMID: 18202343]
  20. J Med Microbiol. 2008 Apr;57(Pt 4):439-443 [PMID: 18349362]
  21. J Clin Microbiol. 2009 Mar;47(3):845-7 [PMID: 19116359]
  22. Clin Microbiol Rev. 2014 Oct;27(4):727-52 [PMID: 25278573]
  23. BMC Infect Dis. 2016 Jun 06;16:246 [PMID: 27268404]
  24. J Clin Microbiol. 2011 Jul;49(7):2688-90 [PMID: 21562104]
  25. Clin Lab. 2013;59(9-10):1179-81 [PMID: 24273945]
  26. Infect Dis (Lond). 2015 Apr;47(4):231-6 [PMID: 25692353]
  27. Lancet Infect Dis. 2003 Oct;3(10):633-43 [PMID: 14522262]
  28. Indian J Med Res. 2012 May;135(5):737-44 [PMID: 22771607]
  29. Clin Infect Dis. 2013 Oct;57(8):i [PMID: 24195114]
  30. Int J Tuberc Lung Dis. 2014 Oct;18(10):1255-7 [PMID: 25216843]
  31. Int J Tuberc Lung Dis. 2015 Jul;19(7):828-33 [PMID: 26056110]
  32. FEMS Immunol Med Microbiol. 2009 Jul;56(2):103-11 [PMID: 19416361]
  33. Expert Rev Mol Diagn. 2017 Jan;17(1):5-7 [PMID: 27892734]
  34. J Clin Microbiol. 2011 Mar;49(3):797-801 [PMID: 21177901]
  35. Int J Tuberc Lung Dis. 2011 Sep;15(9):1211-7, i [PMID: 21943848]
  36. PLoS One. 2014 Apr 17;9(4):e95083 [PMID: 24743770]
  37. J Antimicrob Chemother. 2011 Apr;66(4):730-3 [PMID: 21393153]
  38. Mem Inst Oswaldo Cruz. 2017 Feb;112(2):94-99 [PMID: 28177043]
  39. Lancet Infect Dis. 2018 Jan;18(1):8-10 [PMID: 29198910]
  40. Intern Med. 2015;54(11):1447-50 [PMID: 26028005]
  41. BMC Clin Pathol. 2009 Mar 10;9:2 [PMID: 19284561]
  42. Expert Rev Respir Med. 2017 Jul;11(7):565-579 [PMID: 28562103]
  43. J Clin Microbiol. 2013 Feb;51(2):611-4 [PMID: 23175259]
  44. BMC Infect Dis. 2016 Sep 27;16(1):517 [PMID: 27677540]
  45. J Clin Microbiol. 2015 Feb;53(2):696-8 [PMID: 25428157]
  46. J Clin Microbiol. 2016 Aug;54(8):1984-91 [PMID: 27194691]
  47. Sci Rep. 2016 Feb 10;6:17850 [PMID: 26860462]
  48. Clin Microbiol Infect. 2017 Apr;23(4):267.e5-267.e7 [PMID: 27998822]
  49. Int J Tuberc Lung Dis. 2006 Jun;10(6):663-9 [PMID: 16776454]
  50. Tuberc Respir Dis (Seoul). 2015 Apr;78(2):64-71 [PMID: 25861338]
  51. J Infect. 2016 Mar;72(3):332-7 [PMID: 26724771]
  52. J Clin Microbiol. 2003 Jun;41(6):2616-22 [PMID: 12791888]
  53. Pak J Med Sci. 2015 Jan-Feb;31(1):105-10 [PMID: 25878624]
  54. BMC Infect Dis. 2017 Apr 17;17(1):280 [PMID: 28415989]
  55. Clin Infect Dis. 2012 May;54(10):1388-96 [PMID: 22474220]
  56. Clin Microbiol Infect. 2018 Jun;24(6):604-609 [PMID: 29108952]
  57. Int J Infect Dis. 2017 Sep;62:44-46 [PMID: 28716462]
  58. ERJ Open Res. 2017 May 08;3(2): [PMID: 28491868]
  59. BMC Infect Dis. 2010 Feb 26;10:41 [PMID: 20187922]
  60. J Clin Microbiol. 2013 Nov;51(11):3839-40 [PMID: 23966513]
  61. J Med Microbiol. 2013 Aug;62(Pt 8):1160-1164 [PMID: 23657531]
  62. J Clin Microbiol. 2000 Sep;38(9):3150-5 [PMID: 10970348]
  63. J Clin Microbiol. 2016 Jun;54(6):1434-1441 [PMID: 26984977]
  64. Pediatr Infect Dis J. 2018 Oct;37(10):e261-e263 [PMID: 29474257]
  65. Tuberculosis (Edinb). 2014 Jul;94(4):428-33 [PMID: 24880705]
  66. Lancet Infect Dis. 2011 Nov;11(11):819-24 [PMID: 21764384]
  67. Eur Respir J. 2013 Jul;42(1):252-71 [PMID: 23180585]
  68. Lancet Infect Dis. 2018 Jan;18(1):76-84 [PMID: 29198911]
  69. J Clin Microbiol. 2017 Jun;55(6):1871-1882 [PMID: 28381603]
  70. Jpn J Infect Dis. 2016 Nov 22;69(6):488-492 [PMID: 27000457]
  71. Tuberculosis (Edinb). 2016 May;98:77-85 [PMID: 27156621]
  72. Mikrobiyol Bul. 2014 Apr;48(2):223-32 [PMID: 24819260]
  73. J Microbiol Methods. 2009 Sep;78(3):339-43 [PMID: 19616589]
  74. Clin Infect Dis. 2016 May 1;62(9):1081-8 [PMID: 26839383]
  75. BMC Infect Dis. 2010 May 20;10:123 [PMID: 20487550]
  76. J Clin Microbiol. 2010 Jul;48(7):2495-501 [PMID: 20504986]
  77. Mol Cell Probes. 2001 Dec;15(6):363-74 [PMID: 11851380]
  78. Tuberc Respir Dis (Seoul). 2016 Jul;79(3):134-42 [PMID: 27433173]
  79. J Clin Microbiol. 2017 Mar;55(3):791-800 [PMID: 27974543]
  80. Rev Med Virol. 2008 Nov-Dec;18(6):407-21 [PMID: 18716992]
  81. Genome Med. 2015 May 27;7(1):51 [PMID: 26019726]
  82. Jpn J Infect Dis. 2012;65(3):247-51 [PMID: 22627308]
  83. J Clin Microbiol. 2011 Jan;49(1):173-6 [PMID: 21048015]
  84. PLoS One. 2014 May 01;9(5):e94544 [PMID: 24788724]
  85. J Clin Microbiol. 2013 Jul;51(7):2112-7 [PMID: 23616457]
  86. J Clin Microbiol. 2008 May;46(5):1854-7 [PMID: 18353933]
  87. Tuber Lung Dis. 1995 Oct;76(5):425-30 [PMID: 7496004]
  88. PLoS One. 2017 Apr 21;12(4):e0176186 [PMID: 28430807]
  89. BMC Med. 2013 Aug 29;11:190 [PMID: 23987891]
  90. J Clin Microbiol. 2015 Jul;53(7):2230-7 [PMID: 25972414]

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