First Complete Genome Sequence of Piscine Orthoreovirus Variant 3 Infecting Coho Salmon (Oncorhynchus kisutch) Farmed in Southern Chile. - National Genomics Data Center (CNCB-NGDC)

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First Complete Genome Sequence of Piscine Orthoreovirus Variant 3 Infecting Coho Salmon (Oncorhynchus kisutch) Farmed in Southern Chile.

Harry Bohle, Patricio Bustos, Laura Leiva, Horst Grothusen, Esteban Navas, Alvaro Sandoval, Fernando Bustamante, Karen Montecinos, Alvaro Gaete, Marcos Mancilla

Author Information

Harry Bohle: Laboratorio de Diagnóstico y Biotecnología, ADL Diagnostic Chile SpA, Puerto Montt, Chile.
Patricio Bustos: Laboratorio de Diagnóstico y Biotecnología, ADL Diagnostic Chile SpA, Puerto Montt, Chile.
Laura Leiva: Laboratorio de Diagnóstico y Biotecnología, ADL Diagnostic Chile SpA, Puerto Montt, Chile.
Horst Grothusen: Laboratorio de Diagnóstico y Biotecnología, ADL Diagnostic Chile SpA, Puerto Montt, Chile.
Esteban Navas: Laboratorio de Diagnóstico y Biotecnología, ADL Diagnostic Chile SpA, Puerto Montt, Chile.
Alvaro Sandoval: Laboratorio de Diagnóstico y Biotecnología, ADL Diagnostic Chile SpA, Puerto Montt, Chile.
Fernando Bustamante: Laboratorio de Diagnóstico y Biotecnología, ADL Diagnostic Chile SpA, Puerto Montt, Chile.
Karen Montecinos: Departamento de Salud Animal, Subdirección de Acuicultura, Servicio Nacional de Pesca y Acuicultura, Victoria, Chile.
Alvaro Gaete: Departamento de Salud Animal, Subdirección de Acuicultura, Servicio Nacional de Pesca y Acuicultura, Victoria, Chile.
Marcos Mancilla: Laboratorio de Diagnóstico y Biotecnología, ADL Diagnostic Chile SpA, Puerto Montt, Chile mmancilla@adldiagnostic.cl. ORCID

PMID: 29903813 DOI: 10.1128/genomeA.00484-18

We report here the complete genome of an isolate of piscine orthoreovirus variant 3 sequenced from a moribund Coho Salmon with jaundice that was reared in a seawater farm in southern Chile. The genome consists of 23,627 bp, including 10 segments that range from 1,052 bp (segment S4) to 4,014 bp (segment L1).

J Fish Dis. 2006 Dec;29(12):709-15 [PMID: 17169103]
Virol J. 2013 Jul 11;10:230 [PMID: 23844948]
PLoS One. 2010 Jul 09;5(7):e11487 [PMID: 20634888]
PLoS One. 2016 Oct 27;11(10 ):e0165424 [PMID: 27788206]
Dis Aquat Organ. 2012 May 15;99(1):7-12 [PMID: 22585298]
Viruses. 2018 Apr 02;10 (4): [PMID: 29614838]
PLoS One. 2015 Jul 15;10(7):e0131638 [PMID: 26176955]
Virol J. 2016 Jun 13;13:98 [PMID: 27296722]

Journal Article

Detection of selection signatures in farmed coho salmon (Oncorhynchus kisutch) using dense genome-wide information.Study of the first blastomeres in Coho salmon (Oncorhynchus kisutch).Characterization of coho salmon (Oncorhynchus kisutch) insulin.Consequences of Piscine orthoreovirus genotype 1 (PRV-1) infections in Chinook salmon (Oncorhynchus tshawytscha), coho salmon (O. kisutch) and rainbow trout (O. mykiss).Amoebic gill infection in coho salmon Oncorhynchus kisutch farmed in Korea.Infectious haemolytic anaemia causes jaundice outbreaks in seawater-cultured coho salmon, Oncorhynchus kisutch (Walbaum), in Chile.[Parasitism by Pleistophora sp. in coho salmon (Oncorhynchus kisutch) in Chile].Sexual difference in PCB concentrations of coho salmon (Oncorhynchus kisutch).Growth hormone and seawater adaptation in coho salmon, Oncorhynchus kisutch.Unusual eosinophilic granule cell proliferation in coho salmon (Oncorhynchus kisutch).

Piscine orthoreovirus sequences in escaped farmed Atlantic salmon in Washington and British Columbia.Dissemination of (PRV-1) in Atlantic Salmon () during the Early and Regenerating Phases of Infection.Piscine orthoreovirus subtype 3 (PRV-3) causes heart inflammation in rainbow trout (Oncorhynchus mykiss).PRV-1b and PRV-3a infection is associated with the same clinical disease in coho salmon (Oncorhynchus kisutch) farmed in Chile: unraveling the pathogenesis of the orthoreoviral cardiomyopathy and hemolytic jaundice (OCHJ).Evolution of the Genome Linked to Emergence of Heart and Skeletal Muscle Inflammation in Farmed Atlantic Salmon ().Decreased water temperature enhance genotype 3 replication and severe heart pathology in experimentally infected rainbow trout.Analyses and Insights into Genetic Reassortment and Natural Selection as Key Drivers of Evolution.Emergence and Spread of Genotype 3.Detection of Salmonid IgM Specific to the Outer Capsid Spike Protein Sigma 1 Using Lipid-Modified Antigens in a Bead-Based Antibody Detection Assay.