Fast and near-optimal monitoring for healthcare acquired infection outbreaks.

Bijaya Adhikari, Bryan Lewis, Anil Vullikanti, José Mauricio Jiménez, B Aditya Prakash
Author Information
  1. Bijaya Adhikari: Department of Computer Science, Virginia Tech, Blacksburg, Virginia, United States of America. ORCID
  2. Bryan Lewis: Biocomplexity Institute & Initiative, University of Virginia, Charlottesville, Virginia, United States of America. ORCID
  3. Anil Vullikanti: Biocomplexity Institute & Initiative, University of Virginia, Charlottesville, Virginia, United States of America.
  4. José Mauricio Jiménez: Department of Systems Engineering, United States Military Academy, West Point, New York, United States of America.
  5. B Aditya Prakash: Department of Computer Science, Virginia Tech, Blacksburg, Virginia, United States of America.

Abstract

According to the Centers for Disease Control and Prevention (CDC), one in twenty five hospital patients are infected with at least one healthcare acquired infection (HAI) on any given day. Early detection of possible HAI outbreaks help practitioners implement countermeasures before the infection spreads extensively. Here, we develop an efficient data and model driven method to detect outbreaks with high accuracy. We leverage mechanistic modeling of C. difficile infection, a major HAI disease, to simulate its spread in a hospital wing and design efficient near-optimal algorithms to select people and locations to monitor using an optimization formulation. Results show that our strategy detects up to 95% of "future" C. difficile outbreaks. We design our method by incorporating specific hospital practices (like swabbing for infections) as well. As a result, our method outperforms state-of-the-art algorithms for outbreak detection. Finally, a qualitative study of our result shows that the people and locations we select to monitor as sensors are intuitive and meaningful.

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Grants

  1. R01 GM109718/NIGMS NIH HHS
  2. U01 GM070694/NIGMS NIH HHS

MeSH Term

Algorithms
Clostridioides difficile
Clostridium Infections
Computational Biology
Cross Infection
Disease Outbreaks
Humans
Models, Statistical

Word Cloud

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