Comparative Analysis of CPI-Motif Regulation of Biochemical Functions of Actin Capping Protein.

Patrick McConnell, Marlene Mekel, Alexander G Kozlov, Olivia L Mooren, Timothy M Lohman, John A Cooper
Author Information
  1. Patrick McConnell: Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St. Louis, Missouri 63110, United States.
  2. Marlene Mekel: Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St. Louis, Missouri 63110, United States.
  3. Alexander G Kozlov: Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St. Louis, Missouri 63110, United States.
  4. Olivia L Mooren: Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St. Louis, Missouri 63110, United States.
  5. Timothy M Lohman: Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St. Louis, Missouri 63110, United States.
  6. John A Cooper: Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St. Louis, Missouri 63110, United States. ORCID

Abstract

The heterodimeric actin capping protein (CP) is regulated by a set of proteins that contain CP-interacting (CPI) motifs. Outside of the CPI motif, the sequences of these proteins are unrelated and distinct. The CPI motif and surrounding sequences are conserved within a given protein family, when compared to those of other CPI-motif protein families. Using biochemical assays with purified proteins, we compared the ability of CPI-motif-containing peptides from different protein families (a) to bind to CP, (b) to allosterically inhibit barbed-end capping by CP, and (c) to allosterically inhibit interaction of CP with V-1, another regulator of CP. We found large differences in potency among the different CPI-motif-containing peptides, and the different functional assays showed different orders of potency. These biochemical differences among the CPI-motif peptides presumably reflect interactions between CP and CPI-motif peptides involving amino acid residues that are conserved but are not part of the strictly defined consensus, as it was originally identified in comparisons of sequences of CPI motifs across all protein families [Hernandez-Valladares, M., et al. (2010) Structural characterization of a capping protein interaction motif defines a family of actin filament regulators. , 497-503; Bruck, S., et al. (2006) Identification of a Novel Inhibitory Actin-capping Protein Binding Motif in CD2-associated Protein. , 19196-19203]. These biochemical differences may be important for conserved distinct functions of CPI-motif protein families in cells with respect to the regulation of CP activity and actin assembly near membranes.

References

  1. J Biol Chem. 2010 Sep 10;285(37):29014-26 [PMID: 20630878]
  2. Elife. 2018 Oct 23;7: [PMID: 30351272]
  3. Nat Struct Mol Biol. 2010 Apr;17(4):497-503 [PMID: 20357771]
  4. Cell Signal. 2006 Sep;18(9):1386-95 [PMID: 16325375]
  5. Curr Opin Cell Biol. 2018 Oct;54:1-8 [PMID: 29477121]
  6. J Biol Chem. 2010 Aug 13;285(33):25767-81 [PMID: 20538588]
  7. Proc Natl Acad Sci U S A. 2016 Oct 25;113(43):E6610-E6619 [PMID: 27791032]
  8. Protein Sci. 2013 Jun;22(6):851-8 [PMID: 23526461]
  9. Nucleic Acids Res. 2019 Jul 2;47(W1):W256-W259 [PMID: 30931475]
  10. Mol Biol Cell. 2015 Dec 15;26(25):4577-88 [PMID: 26466680]
  11. Biochemistry. 2002 Oct 1;41(39):11611-27 [PMID: 12269804]
  12. J Biol Chem. 2012 May 4;287(19):15251-62 [PMID: 22411988]
  13. Mol Cell Biol. 2013 Jan;33(1):38-47 [PMID: 23090967]
  14. J Biol Chem. 2012 Oct 5;287(41):34234-45 [PMID: 22879592]
  15. Biophys Rev. 2018 Dec;10(6):1537-1551 [PMID: 30470968]
  16. Nat Commun. 2015 Sep 28;6:8415 [PMID: 26412145]
  17. Nat Rev Mol Cell Biol. 2014 Oct;15(10):677-89 [PMID: 25207437]
  18. PLoS Biol. 2010 Jul 06;8(7):e1000416 [PMID: 20625546]
  19. J Cell Biol. 1986 Dec;103(6 Pt 2):2747-54 [PMID: 3793756]
  20. J Mol Biol. 2010 Dec 17;404(5):794-802 [PMID: 20969875]
  21. J Biol Chem. 2016 Jan 15;291(3):1076-91 [PMID: 26578515]
  22. Cold Spring Harb Perspect Biol. 2016 Aug 01;8(8): [PMID: 26988969]
  23. Mol Biol Cell. 2013 Oct;24(19):3047-55 [PMID: 23904264]
  24. Mol Biol Cell. 2017 Jul 1;28(13):1713-1723 [PMID: 28663287]
  25. J Biol Chem. 2006 Jul 14;281(28):19196-203 [PMID: 16707503]
  26. Biophys J. 2004 Feb;86(2):1074-81 [PMID: 14747342]
  27. EMBO J. 2006 Nov 29;25(23):5626-33 [PMID: 17110933]
  28. Annu Rev Biophys Biophys Chem. 1985;14:189-210 [PMID: 3890879]
  29. J Mol Biol. 2007 Jan 12;365(2):480-501 [PMID: 17059832]
  30. J Biol Chem. 2006 Nov 24;281(47):36347-59 [PMID: 16987810]
  31. Cell Rep. 2018 May 29;23(9):2795-2804 [PMID: 29847807]
  32. Proc Natl Acad Sci U S A. 2014 May 13;111(19):E1970-9 [PMID: 24778263]
  33. Cell Mol Life Sci. 2015 Aug;72(16):3051-67 [PMID: 25948416]
  34. Biochemistry. 1985 Jan 29;24(3):793-9 [PMID: 3994986]
  35. Int Rev Cell Mol Biol. 2008;267:183-206 [PMID: 18544499]

Grants

  1. R01 GM030498/NIGMS NIH HHS
  2. R35 GM118171/NIGMS NIH HHS

MeSH Term

Actins
Allosteric Regulation
Amino Acid Motifs
Animals
CapZ Actin Capping Protein
Dimerization
Eukaryota
Humans
Kinetics
Peptides
Phylogeny
Protein Binding
Protein Conformation
Protein Interaction Domains and Motifs

Chemicals

Actins
CAPZB protein, mouse
CapZ Actin Capping Protein
Capza1 protein, mouse
Peptides

Word Cloud

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