The application of metagenomic next-generation sequencing in diagnosing Chlamydia psittaci pneumonia: a report of five cases.

Lei Gu, Wei Liu, Meng Ru, Jing Lin, Guoqing Yu, Jia Ye, Zheng-An Zhu, Yuebin Liu, Jian Chen, Guoxiang Lai, Wen Wen
Author Information
  1. Lei Gu: Graduate College of Fujian Medical University, Minhou, Fuzhou, 350108, China.
  2. Wei Liu: Department of Respiratory and Critical Care Medicine, Dongfang Hospital of Xiamen University, Fuzhou General Hospital of Fujian Medical University, The 900th Hospital of the Joint Logistic Support Force, PLA, Gulou, Fuzhou, 350025, China.
  3. Meng Ru: Pharmacy Department, The 985th Hospital of the Joint Logistic Support Force, PLA, Yingze, Taiyuan, 030001, China.
  4. Jing Lin: Graduate College of Fujian Medical University, Minhou, Fuzhou, 350108, China.
  5. Guoqing Yu: Department of Nephrology, Dongfang Hospital of Xiamen University, Fuzhou General Hospital of Fujian Medical University, The 900th Hospital of the Joint Logistic Support Force, PLA, Gulou, Fuzhou, 350025, China.
  6. Jia Ye: Department of Respiratory and Critical Care Medicine, Dongfang Hospital of Xiamen University, Fuzhou General Hospital of Fujian Medical University, The 900th Hospital of the Joint Logistic Support Force, PLA, Gulou, Fuzhou, 350025, China.
  7. Zheng-An Zhu: Department of Respiratory and Critical Care Medicine, Dongfang Hospital of Xiamen University, Fuzhou General Hospital of Fujian Medical University, The 900th Hospital of the Joint Logistic Support Force, PLA, Gulou, Fuzhou, 350025, China.
  8. Yuebin Liu: Department of Respiratory and Critical Care Medicine, Dongfang Hospital of Xiamen University, Fuzhou General Hospital of Fujian Medical University, The 900th Hospital of the Joint Logistic Support Force, PLA, Gulou, Fuzhou, 350025, China.
  9. Jian Chen: Department of Respiratory and Critical Care Medicine, Dongfang Hospital of Xiamen University, Fuzhou General Hospital of Fujian Medical University, The 900th Hospital of the Joint Logistic Support Force, PLA, Gulou, Fuzhou, 350025, China.
  10. Guoxiang Lai: Department of Respiratory and Critical Care Medicine, Dongfang Hospital of Xiamen University, Fuzhou General Hospital of Fujian Medical University, The 900th Hospital of the Joint Logistic Support Force, PLA, Gulou, Fuzhou, 350025, China.
  11. Wen Wen: Department of Respiratory and Critical Care Medicine, Dongfang Hospital of Xiamen University, Fuzhou General Hospital of Fujian Medical University, The 900th Hospital of the Joint Logistic Support Force, PLA, Gulou, Fuzhou, 350025, China. fjfzfisher@163.com.

Abstract

BACKGROUND: Chlamydia psittaci pneumonia is a zoonotic infectious disease caused by Chlamydia psittaci. Diagnostic tools, including culture, serologic test and PCR-based methods, are available but prone to false negative results.
CASE PRESENTATION: This report included five cases of Chlamydia psittaci pneumonia. Symptoms and signs common to all 5 cases included fever, coughing, generalized muscle ache, and most notably, inflammatory infiltration of the lungs upon chest CT and X-ray. Metagenomic next-generation sequencing (mNGS) revealed the presence of Chlamydia psittaci in biopsy lung tissue in 3 cases and bronchoalveolar lavage fluid in the remaining 2 cases. Three patients responded to doxycycline plus moxifloxacin; two patients responded to moxifloxacin alone.
CONCLUSIONS: mNGS could be used to diagnose Chlamydia psittaci pneumonia.

Keywords

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Grants

  1. 2015ZDZKHX/National Key Clinical Specialty Discipline Construction Program of China (CN)

MeSH Term

Aged
Aged, 80 and over
Bronchoalveolar Lavage Fluid
Chlamydophila psittaci
Female
High-Throughput Nucleotide Sequencing
Humans
Male
Middle Aged
Pneumonia, Bacterial
Psittacosis
Tomography, X-Ray Computed

Word Cloud

Created with Highcharts 10.0.0ChlamydiapsittacicasespneumoniareportmNGSincludedfivenext-generationsequencingpatientsrespondedmoxifloxacinBACKGROUND:zoonoticinfectiousdiseasecausedDiagnostictoolsincludingcultureserologictestPCR-basedmethodsavailablepronefalsenegativeresultsCASEPRESENTATION:Symptomssignscommon5fevercoughinggeneralizedmuscleachenotablyinflammatoryinfiltrationlungsuponchestCTX-rayMetagenomicrevealedpresencebiopsylungtissue3bronchoalveolarlavagefluidremaining2ThreedoxycyclineplustwoaloneCONCLUSIONS:useddiagnoseapplicationmetagenomicdiagnosingpneumonia:Case

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