Transcriptome dataset from bark and latex tissues of three clones.

Mohd Fahmi Abu Bakar, Urwashi Kamerkar, Siti Nurfazilah Abdul Rahman, Muhd Khairul Luqman Muhd Sakaff, Ahmad Sofiman Othman
Author Information
  1. Mohd Fahmi Abu Bakar: Faculty of Bioresources & Food Industry, Universiti Sultan Zainal Abidin, Besut Campus, 22200 Besut, Terengganu, Malaysia.
  2. Urwashi Kamerkar: School of Biological Sciences, Universiti Sains Malaysia, 11700 Minden, Pulau Pinang, Malaysia.
  3. Siti Nurfazilah Abdul Rahman: School of Biological Sciences, Universiti Sains Malaysia, 11700 Minden, Pulau Pinang, Malaysia.
  4. Muhd Khairul Luqman Muhd Sakaff: Centre of Chemical Biology, Universiti Sains Malaysia, 11900 Bayan Lepas, Penang, Malaysia.
  5. Ahmad Sofiman Othman: School of Biological Sciences, Universiti Sains Malaysia, 11700 Minden, Pulau Pinang, Malaysia.

Abstract

is exploited for its latex production, and it is the only viable source of natural rubber worldwide. The demand for natural rubber remains high due its high-quality properties, which synthetic rubber cannot compete with. In this paper, we present transcriptomic data and analysis of three clones using tissue from latex and bark tissues collected from 10-year-old plant. The combined, assembled transcripts were mapped onto an draft genome. Gene ontology analysis showed that the most abundant transcripts related to molecular functions, followed by biological processes and cellular components. Simple sequence repeats (SSR) and single nucleotide polymorphisms (SNP) were also identified, and these can be useful for selection of parental and new clones in a breeding program. Data generated by RNA sequencing were deposited in the NCBI public repository under accession number PRJNA629890.

Keywords

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