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G3 (Bethesda, Md.)
12 08, 2021;11 (12):

Complete genome sequence of the biocontrol yeast Papiliotrema terrestris strain LS28.

Davide Palmieri, Giuseppe Barone, Riccardo Aiese Cigliano, Filippo De Curtis, Giuseppe Lima, Raffaello Castoria, Giuseppe Ianiri
Author Information
  1. Davide Palmieri: Department of Agricultural, Environmental and Food Sciences, University of Molise, 86100 Campobasso, Italy.
  2. Giuseppe Barone: Department of Agricultural, Environmental and Food Sciences, University of Molise, 86100 Campobasso, Italy.
  3. Riccardo Aiese Cigliano: Sequentia Biotech SL, Barcelona 08018, Spain.
  4. Filippo De Curtis: Department of Agricultural, Environmental and Food Sciences, University of Molise, 86100 Campobasso, Italy.
  5. Giuseppe Lima: Department of Agricultural, Environmental and Food Sciences, University of Molise, 86100 Campobasso, Italy.
  6. Raffaello Castoria: Department of Agricultural, Environmental and Food Sciences, University of Molise, 86100 Campobasso, Italy.
  7. Giuseppe Ianiri: Department of Agricultural, Environmental and Food Sciences, University of Molise, 86100 Campobasso, Italy.
PMID: 34534326 DOI: 10.1093/g3journal/jkab332

Abstract

Papiliotrema terrestris strain LS28 is a biocontrol agent selected for its antagonistic activity against several plant pathogens both in the field and postharvest. The availability of a genome sequencing sets the foundation for the identification of the genetic mechanisms of its antagonistic activity. The genome size is 21.29 Mbp with a G+C content of 58.65%, and genome annotation predicts 8,626 protein-encoding genes. Phylogenetic analysis based on whole-genome data confirms that P. terrestris is a Tremellomycetes more closely related to Papiliotrema flavescens than Papiliotrema laurentii.

Keywords

Papiliotrema terrestris Tremellomycetes biocontrol genome sequencing

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MeSH Term

Basidiomycota
High-Throughput Nucleotide Sequencing
Phylogeny
Saccharomyces cerevisiae
Sequence Analysis, DNA
Journal Article Research Support, Non-U.S. Gov't

Word Cloud

Created with Highcharts 10.0.0PapiliotremagenometerrestrisbiocontrolstrainLS28antagonisticactivitysequencingTremellomycetesagentselectedseveralplantpathogensfieldpostharvestavailabilitysetsfoundationidentificationgeneticmechanismssize2129MbpG+Ccontent5865%annotationpredicts8626protein-encodinggenesPhylogeneticanalysisbasedwhole-genomedataconfirmsPcloselyrelatedflavescenslaurentiiCompletesequenceyeast

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