A Fungal Defensin Inhibiting Bacterial Cell-Wall Biosynthesis with Non-Hemolysis and Serum Stability.

Sudong Qi, Bin Gao, Shunyi Zhu
Author Information
  1. Sudong Qi: Group of Peptide Biology and Evolution, State Key Laboratory of Integrated Management of Pest Insects and Rodents, Institute of Zoology, Chinese Academy of Sciences, 1 Beichen West Road, Chaoyang District, Beijing 100101, China.
  2. Bin Gao: Group of Peptide Biology and Evolution, State Key Laboratory of Integrated Management of Pest Insects and Rodents, Institute of Zoology, Chinese Academy of Sciences, 1 Beichen West Road, Chaoyang District, Beijing 100101, China.
  3. Shunyi Zhu: Group of Peptide Biology and Evolution, State Key Laboratory of Integrated Management of Pest Insects and Rodents, Institute of Zoology, Chinese Academy of Sciences, 1 Beichen West Road, Chaoyang District, Beijing 100101, China. ORCID

Abstract

Defensins are a class of cationic disulfide-bridged antimicrobial peptides (AMPs) present in many eukaryotic organisms and even in bacteria. They primarily include two distinct but evolutionarily related superfamilies ( and ). Defensins in fungi belong to the members of the -superfamily with the cysteine-stabilized α-helical and β-sheet fold. To date, many fungal defensin-like peptides (fDLPs) have been found through gene mining of the genome resource, but only a few have been experimentally characterized. Here, we report the structural and functional characterization of Pyronesin4 (abbreviated as Py4), a fDLP previously identified by genomic sequencing of the basal filamentous ascomycete . Chemically, synthetic Py4 adopts a native-like structure and exhibits activity on an array of Gram-positive bacteria including some clinical isolates of and , a conditioned pathogen inhabiting in human skin. Py4 markedly altered the bacterial morphology and caused cytoplasmic accumulation of the cell-wall synthesis precursor through binding to the membrane-bound Lipid II, indicating that it works as an inhibitor of cell-wall biosynthesis. Py4 showed no hemolysis and high mammalian serum stability. This work identified a new fungal defensin with properties relevant to drug exploration. Intramolecular epistasis between mutational sites of fDLPs is also discussed.

Keywords

References

  1. Adv Exp Med Biol. 2019;1117:3-6 [PMID: 30980349]
  2. Mol Biol Evol. 2021 Oct 27;38(11):5175-5189 [PMID: 34320203]
  3. J Clin Microbiol. 1992 Aug;30(8):2216-7 [PMID: 1500540]
  4. Mol Biol Evol. 2016 Sep;33(9):2345-56 [PMID: 27297472]
  5. Childs Nerv Syst. 2010 Dec;26(12):1795-8 [PMID: 20013125]
  6. Nature. 2005 Oct 13;437(7061):975-80 [PMID: 16222292]
  7. Clin Case Rep. 2021 Jul 21;9(7):e04476 [PMID: 34306691]
  8. Am J Respir Cell Mol Biol. 1995 Mar;12(3):351-7 [PMID: 7873202]
  9. Chem Phys Lipids. 2011 Nov;164(8):766-81 [PMID: 21945565]
  10. Cell Mol Life Sci. 2005 Oct;62(19-20):2257-69 [PMID: 16143827]
  11. Int J Dermatol. 2021 Apr;60(4):509-511 [PMID: 33280093]
  12. Comb Chem High Throughput Screen. 2005 May;8(3):219-33 [PMID: 15892624]
  13. Science. 2010 May 28;328(5982):1168-72 [PMID: 20508130]
  14. Science. 2020 May 1;368(6490): [PMID: 32355003]
  15. J Biol Chem. 2010 Mar 19;285(12):8985-94 [PMID: 20100832]
  16. Immunogenetics. 2019 Jan;71(1):61-69 [PMID: 30280251]
  17. Int J Artif Organs. 2010 Sep;33(9):575-81 [PMID: 20963724]
  18. J Gen Appl Microbiol. 2008 Dec;54(6):385-92 [PMID: 19164881]
  19. Curr Opin Immunol. 2002 Feb;14(1):96-102 [PMID: 11790538]
  20. J Fungi (Basel). 2021 Jul 12;7(7): [PMID: 34356932]
  21. Mol Immunol. 2008 Feb;45(3):828-38 [PMID: 17675235]
  22. Nature. 1981 Jul 16;292(5820):246-8 [PMID: 7019715]
  23. Eur J Haematol. 1990 Jan;44(1):1-8 [PMID: 2407547]
  24. Chem Immunol Allergy. 2005;86:1-21 [PMID: 15976485]
  25. Proteins. 2008 Jul;72(1):229-39 [PMID: 18214975]
  26. Crit Rev Biotechnol. 2020 Nov;40(7):978-992 [PMID: 32781848]
  27. Comb Chem High Throughput Screen. 2009 Feb;12(2):203-11 [PMID: 19199888]
  28. Plant Biol (Stuttg). 2020 Sep;22(5):850-862 [PMID: 32329163]
  29. J Mol Biol. 2019 Aug 23;431(18):3520-3530 [PMID: 31100388]
  30. PLoS Genet. 2013;9(9):e1003820 [PMID: 24068976]
  31. BMJ Case Rep. 2019 Jun 11;12(6): [PMID: 31189544]
  32. Science. 1999 Dec 17;286(5448):2361-4 [PMID: 10600751]
  33. Open Rheumatol J. 2012;6:310-1 [PMID: 23166572]
  34. J Biol Chem. 2012 Dec 7;287(50):42361-72 [PMID: 23093408]
  35. Crit Care Med. 2001 Jul;29(7):1431-7 [PMID: 11445704]
  36. Eur J Biochem. 1997 May 15;246(1):193-9 [PMID: 9210483]
  37. Expert Opin Biol Ther. 2017 Jun;17(6):663-676 [PMID: 28368216]
  38. Clin Infect Dis. 1992 Jan;14(1):49-52 [PMID: 1571462]
  39. Ann Rheum Dis. 1986 Dec;45(12):1029-30 [PMID: 3813666]
  40. Curr Opin Pharmacol. 2009 Oct;9(5):571-6 [PMID: 19734091]
  41. Front Microbiol. 2018 Feb 27;9:320 [PMID: 29599756]
  42. Cureus. 2020 May 28;12(5):e8337 [PMID: 32494545]
  43. Curr Opin Struct Biol. 2018 Jun;50:18-25 [PMID: 29100081]
  44. Rev Inst Med Trop Sao Paulo. 2010 May-Jun;52(3):169-70 [PMID: 20602029]
  45. J Mol Biol. 2021 Sep 3;:167225 [PMID: 34487793]
  46. Blood. 1997 Oct 1;90(7):2796-803 [PMID: 9326247]
  47. Dev Comp Immunol. 2013 Jan-Feb;39(1-2):79-84 [PMID: 22369779]
  48. Genome Announc. 2013 Mar 14;1(2):e0003813 [PMID: 23516183]
  49. J Biol Chem. 1998 Feb 6;273(6):3718-24 [PMID: 9452503]
  50. Comp Immunol Microbiol Infect Dis. 2016 Dec;49:95-101 [PMID: 27865272]
  51. Nat Rev Drug Discov. 2020 May;19(5):311-332 [PMID: 32107480]
  52. Curr Opin Struct Biol. 2021 Aug;69:160-168 [PMID: 34077895]
  53. Pharmaceuticals (Basel). 2014 Aug 18;7(8):866-80 [PMID: 25230677]
  54. Curr Opin Struct Biol. 2014 Feb;24:10-23 [PMID: 24721449]
  55. Biochem Biophys Res Commun. 2009 Sep 18;387(2):393-8 [PMID: 19615342]
  56. Amino Acids. 2018 Aug;50(8):1025-1043 [PMID: 29770866]
  57. Lancet Infect Dis. 2020 Sep;20(9):e216-e230 [PMID: 32653070]
  58. Acta Cardiol. 2021 May;76(3):318-319 [PMID: 32186443]
  59. EMBO Mol Med. 2022 Feb 7;14(2):e14499 [PMID: 34927385]
  60. Trends Immunol. 2014 Sep;35(9):443-50 [PMID: 25113635]
  61. Joint Bone Spine. 2004 May;71(3):240-2 [PMID: 15182799]
  62. FASEB J. 2009 Apr;23(4):1230-45 [PMID: 19088182]
  63. Appl Microbiol Biotechnol. 2015 Aug;99(15):6255-66 [PMID: 25620367]
  64. Proc Natl Acad Sci U S A. 2012 May 29;109(22):8495-500 [PMID: 22586077]

Grants

  1. 31870766/National Natural Science Foundation of China

Word Cloud

Created with Highcharts 10.0.0Py4DefensinsantimicrobialpeptidesmanybacteriafungalfDLPsPyronesin4identifiedcell-wallLipidIIepistasisclasscationicdisulfide-bridgedAMPspresenteukaryoticorganismsevenprimarilyincludetwodistinctevolutionarilyrelatedsuperfamiliesfungibelongmembers-superfamilycysteine-stabilizedα-helicalβ-sheetfolddatedefensin-likefoundgenemininggenomeresourceexperimentallycharacterizedreportstructuralfunctionalcharacterizationabbreviatedfDLPpreviouslygenomicsequencingbasalfilamentousascomyceteChemicallysyntheticadoptsnative-likestructureexhibitsactivityarrayGram-positiveincludingclinicalisolatesconditionedpathogeninhabitinghumanskinmarkedlyalteredbacterialmorphologycausedcytoplasmicaccumulationsynthesisprecursorbindingmembrane-boundindicatingworksinhibitorbiosynthesisshowedhemolysishighmammalianserumstabilityworknewdefensinpropertiesrelevantdrugexplorationIntramolecularmutationalsitesalsodiscussedFungalDefensinInhibitingBacterialCell-WallBiosynthesisNon-HemolysisSerumStabilityPyronemaconfluensUDP-MurNAc-pentapeptidepeptidemoleculardynamicssimulation

Similar Articles

Cited By (2)