An Efficient Way to Screen Inhibitors of Energy-Coupling Factor (ECF) Transporters in a Bacterial Uptake Assay.

Spyridon Bousis, Steffen Winkler, Jörg Haupenthal, Francesco Fulco, Eleonora Diamanti, Anna K H Hirsch
Author Information
  1. Spyridon Bousis: Helmholtz Centre for Infection Research (HZI), Helmholtz Institute for Pharmaceutical Research (HIPS), Campus Building E 8.1, D-66123 Saarbrücken, Germany.
  2. Steffen Winkler: Helmholtz Centre for Infection Research (HZI), Helmholtz Institute for Pharmaceutical Research (HIPS), Campus Building E 8.1, D-66123 Saarbrücken, Germany.
  3. Jörg Haupenthal: Helmholtz Centre for Infection Research (HZI), Helmholtz Institute for Pharmaceutical Research (HIPS), Campus Building E 8.1, D-66123 Saarbrücken, Germany.
  4. Francesco Fulco: Helmholtz Centre for Infection Research (HZI), Helmholtz Institute for Pharmaceutical Research (HIPS), Campus Building E 8.1, D-66123 Saarbrücken, Germany.
  5. Eleonora Diamanti: Helmholtz Centre for Infection Research (HZI), Helmholtz Institute for Pharmaceutical Research (HIPS), Campus Building E 8.1, D-66123 Saarbrücken, Germany. ORCID
  6. Anna K H Hirsch: Helmholtz Centre for Infection Research (HZI), Helmholtz Institute for Pharmaceutical Research (HIPS), Campus Building E 8.1, D-66123 Saarbrücken, Germany. ORCID

Abstract

Herein, we report a novel whole-cell screening assay using as a model microorganism to identify inhibitors of energy-coupling factor (ECF) transporters. This promising and underexplored target may have important pharmacological potential through modulation of vitamin homeostasis in bacteria and, importantly, it is absent in humans. The assay represents an alternative, cost-effective and fast solution to demonstrate the direct involvement of these membrane transporters in a native biological environment rather than using a low-throughput in vitro assay employing reconstituted proteins in a membrane bilayer system. Based on this new whole-cell screening approach, we demonstrated the optimization of a weak hit compound () into a small molecule () with improved in vitro and whole-cell activities. This study opens the possibility to quickly identify novel inhibitors of ECF transporters and optimize them based on structure-activity relationships.

Keywords

References

  1. Nat Rev Microbiol. 2014 Feb;12(2):79-87 [PMID: 24362466]
  2. J Bacteriol. 2006 Jan;188(1):317-27 [PMID: 16352848]
  3. J Bacteriol. 1979 Aug;139(2):552-9 [PMID: 110791]
  4. J Bacteriol. 1979 Mar;137(3):1308-14 [PMID: 108244]
  5. J Bacteriol. 2009 Jan;191(1):42-51 [PMID: 18931129]
  6. Pharmaceutics. 2021 Dec 21;14(1): [PMID: 35056900]
  7. Nucleic Acids Res. 2021 Jan 8;49(D1):D480-D489 [PMID: 33237286]
  8. J Infect Dis. 2008 Apr 15;197(8):1079-81 [PMID: 18419525]
  9. J Med Chem. 2022 Jul 14;65(13):8869-8880 [PMID: 35709475]
  10. Bioinformatics. 2012 Apr 15;28(8):1166-7 [PMID: 22368248]
  11. J Bacteriol. 2008 Nov;190(22):7591-4 [PMID: 18776013]

Grants

  1. 757913/European Research Council
  2. 713482/European Union

MeSH Term

Bacteria
Bacterial Proteins
Biological Transport
Cell Membrane
Humans
Membrane Transport Proteins
Models, Molecular

Chemicals

Bacterial Proteins
Membrane Transport Proteins

Word Cloud

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