Nano-functionalization and evaluation of antimicrobial activity of against the TolB protein of - An antibacterial and computational study.

Himporna Nath, Ankita Khataniar, Kusum K Bania, Nobendu Mukerjee, Sami A Al-Hussain, Magdi E A Zaki, Sanchaita Rajkhowa
Author Information
  1. Himporna Nath: Centre for Biotechnology and Bioinformatics, Dibrugarh University, Dibrugarh, Assam, India.
  2. Ankita Khataniar: Centre for Biotechnology and Bioinformatics, Dibrugarh University, Dibrugarh, Assam, India.
  3. Kusum K Bania: Department of Chemical Sciences, Tezpur University, Tezpur, Assam, India.
  4. Nobendu Mukerjee: Department of Microbiology, West Bengal State University, West Bengal, Kolkata, India.
  5. Sami A Al-Hussain: Department of Chemistry, Imam Mohammad Ibn Saud Islamic University (IMSIU), Riyadh, Saudi Arabia.
  6. Magdi E A Zaki: Department of Chemistry, Imam Mohammad Ibn Saud Islamic University (IMSIU), Riyadh, Saudi Arabia.
  7. Sanchaita Rajkhowa: Centre for Biotechnology and Bioinformatics, Dibrugarh University, Dibrugarh, Assam, India.

Abstract

Introduction: Antibacterial drug resistance, brought on by the overuse of antibiotics, is one of the biggest threats to human health. It is crucial to consider cutting-edge strategies, such as herbal remedies, to control multidrug-resistant (MDR) bacteria.
Methods: This study evaluated the phytochemical, antioxidant and antibacterial properties of the various extracts. Functionalization of the isolated active compound was done using gold (Au) and silver (Ag) nanoparticles (NPs). Further, to understand the interaction of the isolated class, Cordifolisides, with its target, various in-silico methods were used.
Results and Discussion: The plant was reported from the Charaideo district of Assam, whose methanolic stem extract showed the maximum activity towards the nosocomial pathogen . Consequently, the active compound was isolated and characterized as belonging to the class Cordifoliside using NMR. The AuNPs and AgNPs functionalized isolates showed enhanced antimicrobial activity against compared to the unfunctionalized isolate. The most reactive compound, Cordifoliside C was determined using Density Functional Theory (DFT) analysis, whose interactions with the TolB protein were studied using molecular docking methods, which revealed good binding interactions of Cordifoliside C with the TolB protein.
Conclusion: This study offers enormous potential for drug design and might be used as a pipeline to address the urgent problem of multidrug-resistance in bacteria. Graphical Abstract.

Keywords

Associated Data

figshare | 10.6084/m9.figshare.21830175

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Word Cloud

Created with Highcharts 10.0.0usingCordifolisideTolBstudyisolatedcompoundactivityCproteindrugbacteriaantibacterialvariousactivegoldsilvernanoparticlesclassmethodsusedwhoseshowedantimicrobialDensityFunctionalTheoryinteractionsmoleculardockingIntroduction:Antibacterialresistancebroughtoveruseantibioticsonebiggestthreatshumanhealthcrucialconsidercutting-edgestrategiesherbalremediescontrolmultidrug-resistantMDRMethods:evaluatedphytochemicalantioxidantpropertiesextractsFunctionalizationdoneAuAgNPsunderstandinteractionCordifolisidestargetin-silicoResultsDiscussion:plantreportedCharaideodistrictAssammethanolicstemextractmaximumtowardsnosocomialpathogenConsequentlycharacterizedbelongingNMRAuNPsAgNPsfunctionalizedisolatesenhancedcomparedunfunctionalizedisolatereactivedeterminedDFTanalysisstudiedrevealedgoodbindingConclusion:offersenormouspotentialdesignmightpipelineaddressurgentproblemmultidrug-resistanceGraphicalAbstractNano-functionalizationevaluation-computationalPseudomonasaeruginosa

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