First Detection and Molecular Characterization of ST308 in Greece.

Katerina Tsilipounidaki, Christos-George Gkountinoudis, Zoi Florou, George C Fthenakis, Vivi Miriagou, Efthymia Petinaki
Author Information
  1. Katerina Tsilipounidaki: Faculty of Medicine, University of Thessaly, 41500 Larissa, Greece. ORCID
  2. Christos-George Gkountinoudis: Faculty of Medicine, University of Thessaly, 41500 Larissa, Greece.
  3. Zoi Florou: Faculty of Medicine, University of Thessaly, 41500 Larissa, Greece.
  4. George C Fthenakis: Veterinary Faculty, University of Thessaly, 43100 Karditsa, Greece.
  5. Vivi Miriagou: Laboratory of Bacteriology, Hellenic Pasteur Institute, 11521 Athens, Greece. ORCID
  6. Efthymia Petinaki: Faculty of Medicine, University of Thessaly, 41500 Larissa, Greece.

Abstract

The objective of the present study is to report the detection and the molecular characterization of nine -positive isolates, all of which belonged to the epidemic high-risk international clone ST308, and all were isolated from patients in a tertiary care hospital in Central Greece from May to July 2023.The isolates were characterized by whole genome sequencing to obtain multi-locus sequencing typing (MLST) and identify the -environment and resistome and virulence genes content. In silico MLST analysis showed that all isolates belonged to the high-risk ST308 international clone. All strains possessed 22 different genes, encoding resistance to various antimicrobial agents. Whole genome sequencing revealed that the was chromosomally located within the integrative and conjugative element ICE and that it was part of one cassette along with two other resistance genes, and . Two additional resistance cassettes were also found in the genome, which included the arrays of , , , and , , , , . Additionally, the strains possessed various virulence genes, e.g., , , , , , and . All of the isolates shared identical genomes, which showed 98% similarity with the ST308 genome (acc. no CP020703), previously reported from Singapore. To our knowledge, this is the first report of ST308 -positive isolation in Europe, which indicates the transmission dynamics of this high-risk clone.

Keywords

References

  1. Infect Drug Resist. 2022 Jun 08;15:2929-2936 [PMID: 35706928]
  2. Microbes Infect. 2022 Jun;24(4):104950 [PMID: 35139390]
  3. Front Microbiol. 2022 Sep 20;13:951857 [PMID: 36204631]
  4. Eur J Clin Microbiol Infect Dis. 2019 May;38(5):921-926 [PMID: 30826996]
  5. Int J Med Microbiol. 2018 Mar;308(2):279-289 [PMID: 29276044]
  6. Drug Resist Updat. 2019 May;44:100640 [PMID: 31492517]
  7. Int J Mol Sci. 2021 Mar 18;22(6): [PMID: 33803907]
  8. Antimicrob Agents Chemother. 2009 Dec;53(12):5046-54 [PMID: 19770275]
  9. Microbiol Spectr. 2022 Oct 26;10(5):e0143922 [PMID: 36214677]
  10. Nat Rev Microbiol. 2021 May;19(5):331-342 [PMID: 33214718]
  11. Lancet Infect Dis. 2010 Sep;10(9):597-602 [PMID: 20705517]
  12. J Antimicrob Chemother. 2019 Aug 1;74(8):2220-2224 [PMID: 31081022]
  13. Life (Basel). 2023 Jun 21;13(7): [PMID: 37511802]
  14. Water Res. 2019 Jun 15;157:579-586 [PMID: 30999256]
  15. Clin Microbiol Infect. 2022 Apr;28(4):521-547 [PMID: 34923128]
  16. Int J Antimicrob Agents. 2020 Dec;56(6):106196 [PMID: 33045347]
  17. Microorganisms. 2020 Nov 28;8(12): [PMID: 33260774]
  18. J Antimicrob Chemother. 2015 May;70(5):1322-30 [PMID: 25583750]
  19. Infect Drug Resist. 2018 Nov 15;11:2321-2333 [PMID: 30532565]
  20. J Clin Microbiol. 2004 Dec;42(12):5644-9 [PMID: 15583294]
  21. Microb Drug Resist. 2023 Aug;29(8):333-343 [PMID: 37145891]
  22. Microorganisms. 2023 Feb 17;11(2): [PMID: 36838481]
  23. Commun Biol. 2018 May 31;1:57 [PMID: 30271939]
  24. J Glob Antimicrob Resist. 2018 Jun;13:271-273 [PMID: 29432937]
  25. Int J Mol Sci. 2023 Jan 12;24(2): [PMID: 36675030]
  26. Microbiol Spectr. 2023 Jun 15;11(3):e0403322 [PMID: 37042789]
  27. Hippokratia. 2012 Oct;16(4):303-7 [PMID: 23935307]
  28. Ann Lab Med. 2023 Mar 1;43(2):196-199 [PMID: 36281514]
  29. Int J Antimicrob Agents. 2023 May;61(5):106788 [PMID: 36924802]
  30. Emerg Microbes Infect. 2021 Dec;10(1):1706-1716 [PMID: 34384341]

Word Cloud

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