Transcriptomic Analysis of the Reduction in Seed Oil Content through Increased Nitrogen Application Rate in Rapeseed ( L.).

Pengfei Hao, Yun Ren, Baogang Lin, Kaige Yi, Lan Huang, Xi Li, Lixi Jiang, Shuijin Hua
Author Information
  1. Pengfei Hao: Institute of Crop and Nuclear Technology Utilization, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China. ORCID
  2. Yun Ren: Institute of Crop, Huzhou Academy of Agricultural Sciences, Huzhou 313002, China.
  3. Baogang Lin: Institute of Crop and Nuclear Technology Utilization, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China.
  4. Kaige Yi: Institute of Crop and Nuclear Technology Utilization, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China.
  5. Lan Huang: Institute of Crop and Nuclear Technology Utilization, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China.
  6. Xi Li: Institute of Crop and Nuclear Technology Utilization, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China.
  7. Lixi Jiang: College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310058, China.
  8. Shuijin Hua: Institute of Crop and Nuclear Technology Utilization, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China.

Abstract

Nitrogen is essential for improving the seed oil yield of rapeseed ( L.). However, the molecular mechanism by which increased nitrogen rates impact seed oil content is largely unknown. Therefore, a field experiment was conducted to determine how three nitrogen application rates (120, 240, and 360 kg ha) regulated seed oil content via transcriptomic analysis. The results showed that the seed yield and the protein and total N contents increased from N1 to N3, with average increases of 57.2%, 16.9%, and 79.5%, respectively. However, the seed oil content significantly decreased from N1 to N3, with an average decrease of 8.6%. These results were repeated over a number of years. The quantity of oil protein bodies observed under a transmission electron microscope was in accordance with the ultimate seed oil and protein contents. As the nitrogen application rate increased, a substantial number of genes involved in the photosynthesis, glycolysis, and phenylpropanoid biosynthesis pathways were up-regulated, as were TF families, such as AP2/ERF, MYB, and NAC. The newly identified genes were mainly involved in carbohydrate, lipid, and amino acid metabolism. Metabolic flux analysis showed that most of the genes involved in glycolysis and fatty acid biosynthesis had higher transcript levels in the early development stages. Our results provide new insights into the molecular regulation of rapeseed seed oil content through increased nitrogen application rates.

Keywords

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Grants

  1. 32130076/National Natural Science Foundation of China
  2. CARS-12/earmarked fund for the China Agriculture Research System
  3. 2022E10012/the Zhejiang Key Laboratory of Digital Dry Land Crops
  4. 2022SY05/Development for Modern Agricultural Technology in Huzhou

MeSH Term

Humans
Brassica napus
Transcriptome
Nitrogen
Brassica rapa
Seeds
Plant Oils

Chemicals

Nitrogen
Plant Oils

Word Cloud

Created with Highcharts 10.0.0seedoilincreasednitrogencontentproteinratesapplicationresultsgenesinvolvedacidNitrogenyieldrapeseedLHowevermolecularanalysisshowedcontentsN1N3averagenumberglycolysisbiosynthesisfattydevelopmentessentialimprovingmechanismimpactlargelyunknownThereforefieldexperimentconducteddeterminethree120240360kgharegulatedviatranscriptomictotalNincreases572%169%795%respectivelysignificantlydecreaseddecrease86%repeatedyearsquantitybodiesobservedtransmissionelectronmicroscopeaccordanceultimateratesubstantialphotosynthesisphenylpropanoidpathwaysup-regulatedTFfamiliesAP2/ERFMYBNACnewlyidentifiedmainlycarbohydratelipidaminometabolismMetabolicfluxhighertranscriptlevelsearlystagesprovidenewinsightsregulationTranscriptomicAnalysisReductionSeedOilContentIncreasedApplicationRateRapeseedfertilizergeneexpressiongenetictranscriptome

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