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Plant communications
Apr 08, 2024;5 (4): 100786.

HEMU: An integrated comparative genomics database and analysis platform for Andropogoneae grasses.

Yuzhi Zhu, Zijie Wang, Zanchen Zhou, Yuting Liu, Xiang Gao, Weilong Guo, Junpeng Shi
Author Information
  1. Yuzhi Zhu: School of Agriculture, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen 518107, China.
  2. Zijie Wang: School of Agriculture, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen 518107, China.
  3. Zanchen Zhou: School of Agriculture, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen 518107, China.
  4. Yuting Liu: School of Agriculture, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen 518107, China.
  5. Xiang Gao: School of Agriculture, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen 518107, China.
  6. Weilong Guo: Frontiers Science Center for Molecular Design Breeding, Key Laboratory of Crop Heterosis and Utilization (MOE), and Beijing Key Laboratory of Crop Genetic Improvement, China Agricultural University, Beijing 100193, China.
  7. Junpeng Shi: School of Agriculture, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen 518107, China. Electronic address: shijp6@mail.sysu.edu.cn.
PMID: 38155575 DOI: 10.1016/j.xplc.2023.100786

Abstract

This study reports an online database and analysis platform HEMU, which integrates 75 genome assemblies from 20 unique species, large amounts of multi-omics data, and six sophisticated analysis toolkits. HEMU will facilitate comparative genomics analysis within the tribe Andropogoneae.

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MeSH Term

Poaceae
Genomics
Journal Article
Article has an altmetric score of 2

Word Cloud

Created with Highcharts 10.0.0analysisdatabaseplatformHEMUcomparativegenomicsAndropogoneaestudyreportsonlineintegrates75genomeassemblies20uniquespecieslargeamountsmulti-omicsdatasixsophisticatedtoolkitswillfacilitatewithintribeHEMU:integratedgrasses

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