Antibacterial Marinopyrroles and Pseudilins Act as Protonophores.

Gabriel Castro-Falcón, Jan Straetener, Jan Bornikoel, Daniela Reimer, Trevor N Purdy, Anne Berscheid, Florence M Schempp, Dennis Y Liu, Roger G Linington, Heike Brötz-Oesterhelt, Chambers C Hughes
Author Information
  1. Gabriel Castro-Falcón: Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California, San Diego, California 92093, United States.
  2. Jan Straetener: Department of Microbial Bioactive Compounds, Interfaculty Institute of Microbiology and Infection Medicine, University of Tübingen, Tübingen 72076, Germany.
  3. Jan Bornikoel: Department of Microbial Bioactive Compounds, Interfaculty Institute of Microbiology and Infection Medicine, University of Tübingen, Tübingen 72076, Germany.
  4. Daniela Reimer: Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California, San Diego, California 92093, United States.
  5. Trevor N Purdy: Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California, San Diego, California 92093, United States.
  6. Anne Berscheid: Department of Microbial Bioactive Compounds, Interfaculty Institute of Microbiology and Infection Medicine, University of Tübingen, Tübingen 72076, Germany. ORCID
  7. Florence M Schempp: Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California, San Diego, California 92093, United States.
  8. Dennis Y Liu: Department of Chemistry, Simon Fraser University, Burnaby, British Columbia V5A 1S6, Canada.
  9. Roger G Linington: Department of Chemistry, Simon Fraser University, Burnaby, British Columbia V5A 1S6, Canada. ORCID
  10. Heike Brötz-Oesterhelt: Department of Microbial Bioactive Compounds, Interfaculty Institute of Microbiology and Infection Medicine, University of Tübingen, Tübingen 72076, Germany. ORCID
  11. Chambers C Hughes: Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California, San Diego, California 92093, United States. ORCID

Abstract

Elucidating the mechanism of action (MoA) of antibacterial natural products is crucial to evaluating their potential as novel antibiotics. Marinopyrroles, pentachloropseudilin, and pentabromopseudilin are densely halogenated, hybrid pyrrole-phenol natural products with potent activity against Gram-positive bacterial pathogens like . However, the exact way they exert this antibacterial activity has not been established. In this study, we explore their structure-activity relationship, determine their spatial location in bacterial cells, and investigate their MoA. We show that the natural products share a common MoA based on membrane depolarization and dissipation of the proton motive force (PMF) that is essential for cell viability. The compounds show potent protonophore activity but do not appear to destroy the integrity of the cytoplasmic membrane via the formation of larger pores or interfere with the stability of the peptidoglycan sacculus. Thus, our current model for the antibacterial MoA of marinopyrrole, pentachloropseudilin, and pentabromopseudilin stipulates that the acidic compounds insert into the membrane and transport protons inside the cell. This MoA may explain many of the deleterious biological effects in mammalian cells, plants, phytoplankton, viruses, and protozoans that have been reported for these compounds.

References

  1. J Org Chem. 2010 May 21;75(10):3240-50 [PMID: 20405892]
  2. Antimicrob Agents Chemother. 2011 Jul;55(7):3305-12 [PMID: 21502631]
  3. Chembiochem. 2019 Sep 16;20(18):2390-2401 [PMID: 31026110]
  4. Appl Microbiol. 1966 Jul;14(4):649-53 [PMID: 4380876]
  5. J Biol Chem. 2012 Mar 23;287(13):10224-10235 [PMID: 22311987]
  6. Chembiochem. 2022 Sep 16;23(18):e202200349 [PMID: 35839379]
  7. Proc Natl Acad Sci U S A. 2010 Jul 6;107(27):12281-6 [PMID: 20566861]
  8. Mar Drugs. 2013 Aug 15;11(8):2927-48 [PMID: 23955285]
  9. Cell Death Dis. 2013 Oct 24;4:e880 [PMID: 24157874]
  10. Antimicrob Agents Chemother. 2022 Jan 18;66(1):e0079421 [PMID: 34662196]
  11. Org Lett. 2005 Jun 9;7(12):2501-4 [PMID: 15932233]
  12. ACS Chem Biol. 2022 Oct 21;17(10):2836-2848 [PMID: 36179367]
  13. Angew Chem Int Ed Engl. 2009;48(43):8042-6 [PMID: 19739175]
  14. Angew Chem Int Ed Engl. 2014 Feb 17;53(8):2235-9 [PMID: 24446431]
  15. Int J Med Microbiol. 2019 Nov;309(7):151329 [PMID: 31331697]
  16. Mol Biosyst. 2013 Jul;9(7):1837-48 [PMID: 23609915]
  17. Org Lett. 2008 Feb 21;10(4):629-31 [PMID: 18205372]
  18. Mar Drugs. 2012 Apr;10(4):953-962 [PMID: 22690153]
  19. Nat Methods. 2012 Jun 28;9(7):676-82 [PMID: 22743772]
  20. Chem Sci. 2021 Nov 24;12(48):16023-16034 [PMID: 35024125]
  21. J Nat Prod. 2019 Apr 26;82(4):1024-1028 [PMID: 30793902]
  22. Nat Microbiol. 2016 Jun 20;1(7):16077 [PMID: 27572972]
  23. Chem Pharm Bull (Tokyo). 1995 Apr;43(4):537-46 [PMID: 7600609]
  24. Eur J Med Chem. 2022 Aug 5;238:114436 [PMID: 35598412]
  25. Tetrahedron Lett. 2011 Apr 27;52(17):2041-2043 [PMID: 21499535]
  26. J Am Chem Soc. 2009 Sep 2;131(34):12094-6 [PMID: 19673475]
  27. Br J Haematol. 2018 Jan;180(1):157-159 [PMID: 27523575]
  28. Appl Environ Microbiol. 2003 Feb;69(2):1305-7 [PMID: 12571063]
  29. ACS Bio Med Chem Au. 2022 Aug 17;2(4):419-436 [PMID: 35996473]
  30. Chem Commun (Camb). 2017 Feb 14;53(14):2272-2274 [PMID: 28154844]
  31. Antimicrob Agents Chemother. 2019 Sep 23;63(10): [PMID: 31405863]
  32. Nature. 2016 Jul 27;535(7613):511-6 [PMID: 27466123]
  33. Nat Struct Mol Biol. 2009 Jan;16(1):80-8 [PMID: 19122661]
  34. Sci Rep. 2018 Oct 19;8(1):15498 [PMID: 30341338]
  35. Mar Drugs. 2014 Apr 30;12(5):2458-70 [PMID: 24796304]
  36. J Biol Chem. 2011 Aug 26;286(34):29700-8 [PMID: 21680745]

Grants

  1. K12 GM068524/NIGMS NIH HHS

MeSH Term

Animals
Anti-Bacterial Agents
Pyrroles
Hydrocarbons, Chlorinated
Biological Products
Microbial Sensitivity Tests
Mammals

Chemicals

pentachloropseudilin
Anti-Bacterial Agents
Pyrroles
Hydrocarbons, Chlorinated
Biological Products

Word Cloud

Created with Highcharts 10.0.0MoAantibacterialnaturalproductsactivitymembranecompoundsMarinopyrrolespentachloropseudilinpentabromopseudilinpotentbacterialcellsshowcellElucidatingmechanismactioncrucialevaluatingpotentialnovelantibioticsdenselyhalogenatedhybridpyrrole-phenolGram-positivepathogenslikeHoweverexactwayexertestablishedstudyexplorestructure-activityrelationshipdeterminespatiallocationinvestigatesharecommonbaseddepolarizationdissipationprotonmotiveforcePMFessentialviabilityprotonophoreappeardestroyintegritycytoplasmicviaformationlargerporesinterferestabilitypeptidoglycansacculusThuscurrentmodelmarinopyrrolestipulatesacidicinserttransportprotonsinsidemayexplainmanydeleteriousbiologicaleffectsmammalianplantsphytoplanktonvirusesprotozoansreportedAntibacterialPseudilinsActProtonophores

Similar Articles

Cited By