Lytic Spectra of Tailed Bacteriophages: A Systematic Review and Meta-Analysis.

Ivan M Pchelin, Andrei V Smolensky, Daniil V Azarov, Artemiy E Goncharov
Author Information
  1. Ivan M Pchelin: Department of Molecular Microbiology, Institute of Experimental Medicine, Saint Petersburg 197022, Russia. ORCID
  2. Andrei V Smolensky: Department of Computer Science, Neapolis University Pafos, Paphos 8042, Cyprus.
  3. Daniil V Azarov: Department of Molecular Microbiology, Institute of Experimental Medicine, Saint Petersburg 197022, Russia.
  4. Artemiy E Goncharov: Department of Molecular Microbiology, Institute of Experimental Medicine, Saint Petersburg 197022, Russia. ORCID

Abstract

As natural predators of bacteria, tailed bacteriophages can be used in biocontrol applications, including antimicrobial therapy. Also, phage lysis is a detrimental factor in technological processes based on bacterial growth and metabolism. The spectrum of bacteria bacteriophages interact with is known as the host range. Phage science produced a vast amount of host range data. However, there has been no attempt to analyse these data from the viewpoint of modern phage and bacterial taxonomy. Here, we performed a meta-analysis of spotting and plaquing host range data obtained on strains of production host species. The main metric of our study was the host range value calculated as a ratio of lysed strains to the number of tested bacterial strains. We found no boundary between narrow and broad host ranges in tailed phages taken as a whole. Family-level groups of strictly lytic bacteriophages had significantly different median plaquing host range values in the range from 0.18 () to 0.70 (). In phages, broad host ranges were associated with decreased efficiency of plating. Bacteriophage morphology, genome size, and the number of tRNA-coding genes in phage genomes did not correlate with host range values. From the perspective of bacterial species, median plaquing host ranges varied from 0.04 in bacteriophages infecting to 0.73 in phages. Taken together, our results imply that taxonomy of bacteriophages and their bacterial hosts can be predictive of intraspecies host ranges.

Keywords

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Grants

  1. 075-15-2022-302/Ministry of Science and Higher Education of the Russian Federation

MeSH Term

Host Specificity
Bacteriophages
Bacteria
Genome, Viral

Word Cloud

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