Pan-cancer bioinformatics analysis of TIPRL in human tumors.

Xuezhong Zhang, Hao Xue, Yuanyuan Lv, Yuntao Zhou, Kaihui Sha, Tonggang Liu
Author Information
  1. Xuezhong Zhang: Department of Laboratory Medicine, Zibo Central Hospital, Zibo, Shandong, China.
  2. Hao Xue: Department of Neurology, Zibo Central Hospital, Zibo, Shandong, China.
  3. Yuanyuan Lv: Department of Cardiology, Zibo Central Hospital, Zibo, Shandong, China.
  4. Yuntao Zhou: Department of Laboratory Medicine, Zibo Central Hospital, Zibo, Shandong, China. 18678187219@163.com.
  5. Kaihui Sha: Binzhou Medical University School of Nursing, Binzhou, Shandong, China. Skhui328175@163.com.
  6. Tonggang Liu: Department of Infectious Diseases, Binzhou Medical University Hospital, Binzhou, Shandong, China. Liutonggang123@126.com.

Abstract

INTRODUCTION: The TOR signaling pathway regulator-like (TIPRL) gene plays a multifaceted role in cancer, yet its pan-cancer profile remains underexplored. This study investigates TIPRL expression across multiple cancers and its associations with survival, genetic alterations, immune infiltration, and functional pathways, providing insights into TIPRL's role as a potential prognostic and therapeutic target.
METHODS: TIPRL expression and prognostic significance across tumor types were analyzed using TCGA_GTEx and CPTAC data in R software and platforms like GEPIA2 and UALCAN. Genetic alterations and 3D structures were evaluated through cBioPortal. Associations with RNA modifications, immune checkpoints, immune cell infiltration, TMB, MSI, HRD, and enriched pathways were assessed via R and STRING databases, employing survival analysis, ssGSEA, and enrichment analyses.
RESULTS: TIPRL expression was elevated in most cancers, with significant stage-specific associations observed in KICH, KIRP, and LUSC. High TIPRL expression correlated with worse overall survival in ACC, BRCA, HNSC, KICH, LIHC, and MESO, suggesting its role in prognosis. Genetic analysis identified amplifications as the main alteration, with varied clinical relevance across cancers. RNA modifications in TIPRL, particularly m1A, m5C, and m6A, suggested potential regulatory mechanisms. Immune infiltration analysis revealed TIPRL's varied correlations with immune cell types and immune scores, differing by cancer type. TIPRL also positively correlated with TMB, MSI, and HRD in several cancers, indicating its association with genomic instability. Enrichment analyses highlighted TIPRL's involvement in processes like oxidative phosphorylation and autophagy, underscoring its influence in tumorigenesis.
CONCLUSION: These findings establish TIPRL as a significant biomarker in cancer progression and immune regulation, warranting further exploration into its therapeutic implications across diverse tumor types.

Keywords

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Word Cloud

Created with Highcharts 10.0.0TIPRLimmuneanalysisexpressionacrosscancersrolecancersurvivalinfiltrationTIPRL'stypesTORsignalingpathwayregulator-likegeneassociationsalterationspathwayspotentialprognostictherapeutictumorRlikeGeneticRNAmodificationscellTMBMSIHRDanalysessignificantKICHcorrelatedvariedPan-cancerINTRODUCTION:playsmultifacetedyetpan-cancerprofileremainsunderexploredstudyinvestigatesmultiplegeneticfunctionalprovidinginsightstargetMETHODS:significanceanalyzedusingTCGA_GTExCPTACdatasoftwareplatformsGEPIA2UALCAN3DstructuresevaluatedcBioPortalAssociationscheckpointsenrichedassessedviaSTRINGdatabasesemployingssGSEAenrichmentRESULTS:elevatedstage-specificobservedKIRPLUSCHighworseoverallACCBRCAHNSCLIHCMESOsuggestingprognosisidentifiedamplificationsmainalterationclinicalrelevanceparticularlym1Am5Cm6AsuggestedregulatorymechanismsImmunerevealedcorrelationsscoresdifferingtypealsopositivelyseveralindicatingassociationgenomicinstabilityEnrichmenthighlightedinvolvementprocessesoxidativephosphorylationautophagyunderscoringinfluencetumorigenesisCONCLUSION:findingsestablishbiomarkerprogressionregulationwarrantingexplorationimplicationsdiversebioinformaticshumantumorsBioinformaticsTumor

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