Susceptibility to Lenacapavir Among Newly Diagnosed HIV-Positive Patients Followed Up in Mozambique That Presented With Primary Antiretroviral Resistance to Other Classes.

Cruz S Sebasti��o, Jamila Bathy, Tacilta Nhampossa, Andr�� Santos, Mafalda Miranda, Neusa Magode Manhi��a, Rub��o Bila, Delfino Vubil, Sofia Seabra, Maria Ros��rio O Martins, Marta Giovanetti, Perpetua Gomes, Marta Pingarilho, Ana B Abecasis, Victor Pimentel
Author Information
  1. Cruz S Sebasti��o: Global Health and Tropical Medicine (GHTM), Associate Laboratory in Translation and Innovation Towards Global Health (LA-REAL), Instituto de Higiene e Medicina Tropical (IHMT), Universidade NOVA de Lisboa (UNL), Lisboa, Portugal. ORCID
  2. Jamila Bathy: Centro de Investiga����o em Sa��de de Manhi��a (CISM), Manhi��a, Mozambique.
  3. Tacilta Nhampossa: Centro de Investiga����o em Sa��de de Manhi��a (CISM), Manhi��a, Mozambique.
  4. Andr�� Santos: Global Health and Tropical Medicine (GHTM), Associate Laboratory in Translation and Innovation Towards Global Health (LA-REAL), Instituto de Higiene e Medicina Tropical (IHMT), Universidade NOVA de Lisboa (UNL), Lisboa, Portugal.
  5. Mafalda Miranda: Global Health and Tropical Medicine (GHTM), Associate Laboratory in Translation and Innovation Towards Global Health (LA-REAL), Instituto de Higiene e Medicina Tropical (IHMT), Universidade NOVA de Lisboa (UNL), Lisboa, Portugal.
  6. Neusa Magode Manhi��a: Servi��o Distrital de Sa��de, Mulher e A����o Social (SDSMAS) de Manhi��a, Manhi��a, Mo��ambique.
  7. Rub��o Bila: Servi��o Distrital de Sa��de, Mulher e A����o Social (SDSMAS) de Manhi��a, Manhi��a, Mo��ambique.
  8. Delfino Vubil: Centro de Investiga����o em Sa��de de Manhi��a (CISM), Manhi��a, Mozambique.
  9. Sofia Seabra: Global Health and Tropical Medicine (GHTM), Associate Laboratory in Translation and Innovation Towards Global Health (LA-REAL), Instituto de Higiene e Medicina Tropical (IHMT), Universidade NOVA de Lisboa (UNL), Lisboa, Portugal.
  10. Maria Ros��rio O Martins: Global Health and Tropical Medicine (GHTM), Associate Laboratory in Translation and Innovation Towards Global Health (LA-REAL), Instituto de Higiene e Medicina Tropical (IHMT), Universidade NOVA de Lisboa (UNL), Lisboa, Portugal.
  11. Marta Giovanetti: Department of Science and Technology for Humans and the Environment, University of Campus Bio-Medico di Roma, Rome, Italy. ORCID
  12. Perpetua Gomes: Laborat��rio de Biologia Molecular (LMCBM, SPC, CHLO-HEM), Lisbon, Portugal.
  13. Marta Pingarilho: Global Health and Tropical Medicine (GHTM), Associate Laboratory in Translation and Innovation Towards Global Health (LA-REAL), Instituto de Higiene e Medicina Tropical (IHMT), Universidade NOVA de Lisboa (UNL), Lisboa, Portugal.
  14. Ana B Abecasis: Global Health and Tropical Medicine (GHTM), Associate Laboratory in Translation and Innovation Towards Global Health (LA-REAL), Instituto de Higiene e Medicina Tropical (IHMT), Universidade NOVA de Lisboa (UNL), Lisboa, Portugal.
  15. Victor Pimentel: Global Health and Tropical Medicine (GHTM), Associate Laboratory in Translation and Innovation Towards Global Health (LA-REAL), Instituto de Higiene e Medicina Tropical (IHMT), Universidade NOVA de Lisboa (UNL), Lisboa, Portugal. ORCID

Abstract

Multidrug-resistant HIV patients have limited ART options. lenacapavir (LEN) is a capsid inhibitor that exhibits substantial antiviral activity in patients with therapeutic failure but is also proposed for PrEP. Herein, we assessed LEN susceptibility among ART-naive HIV patients with drug resistance in Mozambique. In this study, 63 patients with DRM against PIs, NRTIs, NNRTIs, and INSTIs were included. The gag (p24) and env fragments were amplified with a low-cost in-house protocol and sequenced with nanopore. HIVDR database from Stanford University was used to assess LEN resistance and geno2pheno to assess viral tropism and protease/maturation inhibitor-associated mutations. A total of 59 patients were successfully sequenced. About 29% had DRMs to PIs, 5% to NRTI, 83% to NNRTI, and 2% to INSTI. No DRMs to LEN were detected. Additionally, 42% of the sequences presented protease/maturation inhibitor-associated mutations. A relationship was observed between the E138A/G mutation and protease/maturation inhibitors (p���=���0.004). We identified changes at the first codon position of position 56 of the p24 gag gene, which represents a key site for resistance to LEN. Also, codon 66 was highly conserved. Our results support the potential effectiveness of lenacapavir as a PrEP regimen or rescue therapy for patients with at least one drug-resistance mutation.

Keywords

References

  1. J Clin Lab Anal. 2008;22(2):106-13 [PMID: 18348315]
  2. N Engl J Med. 2022 May 12;386(19):1793-1803 [PMID: 35544387]
  3. Antiviral Res. 2024 Oct;230:105988 [PMID: 39154752]
  4. Infect Dis Clin North Am. 2024 Sep;38(3):453-474 [PMID: 38871567]
  5. Nat Protoc. 2017 Jun;12(6):1261-1276 [PMID: 28538739]
  6. J Antimicrob Chemother. 2020 Jun 1;75(6):1588-1590 [PMID: 32154864]
  7. Int J Mol Sci. 2020 Feb 25;21(5): [PMID: 32106437]
  8. J Virol. 2009 Jul;83(14):7049-61 [PMID: 19403671]
  9. J Gen Intern Med. 2020 Apr;35(4):1285-1288 [PMID: 31965523]
  10. Lancet HIV. 2019 Nov;6(11):e788-e799 [PMID: 31558423]
  11. Front Microbiol. 2022 Apr 12;13:854974 [PMID: 35495642]
  12. Acad Pediatr. 2024 Sep-Oct;24(7):1110-1115 [PMID: 38631476]
  13. N Engl J Med. 2024 Nov 27;: [PMID: 39602624]
  14. Pathogens. 2021 Aug 13;10(8): [PMID: 34451492]
  15. mBio. 2017 Sep 26;8(5): [PMID: 28951475]
  16. J Antimicrob Chemother. 2024 Nov 4;79(11):2906-2915 [PMID: 39225016]
  17. mBio. 2022 Oct 26;13(5):e0180422 [PMID: 36190128]
  18. AIDS Care. 2021 Jun;33(6):712-720 [PMID: 32951437]
  19. J Acquir Immune Defic Syndr. 2024 Oct 1;97(2):142-149 [PMID: 39250648]
  20. Viruses. 2024 Mar 04;16(3): [PMID: 38543764]
  21. Front Microbiol. 2024 Apr 18;15:1388729 [PMID: 38699474]
  22. Viruses. 2022 Sep 09;14(9): [PMID: 36146798]
  23. Sci Rep. 2017 Jun 16;7(1):3717 [PMID: 28623276]
  24. Nucleic Acids Res. 2003 Jul 1;31(13):3850-5 [PMID: 12824435]
  25. J Antimicrob Chemother. 2020 Jan 1;75(1):170-182 [PMID: 31617907]
  26. N Engl J Med. 2024 Oct 3;391(13):1179-1192 [PMID: 39046157]

Grants

  1. /This study was funded by FCT-Foundation for Science and Technology (MARVEL project - PTDC/SAU-PUB/4018/2021), GHTM-UID/04413/2020, and LA-REAL-LA/P/0117/2020.

MeSH Term

Humans
HIV Infections
Mozambique
Male
Female
Adult
HIV-1
Anti-HIV Agents
Drug Resistance, Viral
Middle Aged
Mutation
Microbial Sensitivity Tests
Drug Resistance, Multiple, Viral

Chemicals

Anti-HIV Agents

Word Cloud

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