Identification of Antimicrobial Peptides from , a UV and Gamma Radiation Tolerant Bacterium.

Sam Woong Kim, Woo Young Bang
Author Information
  1. Sam Woong Kim: Agri-Food Bio Convergence Institute, Gyeongsang National University, Jinju 52725, Republic of Korea.
  2. Woo Young Bang: Biodiversity Research and Cooperation Division, National Institute of Biological Resources (NIBR), Environmental Research Complex, Incheon 22689, Republic of Korea. ORCID

Abstract

BACKGROUND: , a UV and gamma radiation-tolerant bacterium, was reported to have superior antibacterial activities against a variety of pathogenic bacteria through the production of antimicrobial peptides (AMPs), but nothing is known about its AMPs.
METHODS/RESULTS: In this study, our genomic and transcriptomic data showed that the genome contains 11 gene candidates, designated as NB_AMP1 to NB_AMP11, which are expressed differently in logarithmic growth and stationary phase. Moreover, the cell-free supernatant of all DH5α strains containing cloned except for NB_AMP5 and NB_AMP7 exhibited antibacterial activities against both Gram-negative and Gram-positive bacteria such as and . Synthetic AMPs supported the antibacterial activities of cloned , and, in particular, the synthetic NB_AMP2 showed superior antibacterial activities against both and .
CONCLUSIONS: Altogether, these results suggest that the candidates from may function as antimicrobial peptides, effectively causing cellular lysis through pore formation in the bacterial membrane.

Keywords

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Grants

  1. NIBR202019103./National Institute of Biological Resources

MeSH Term

Ultraviolet Rays
Gamma Rays
Antimicrobial Peptides
Staphylococcus aureus
Escherichia coli
Anti-Bacterial Agents
Bacterial Proteins
Microbial Sensitivity Tests
Radiation Tolerance

Chemicals

Antimicrobial Peptides
Anti-Bacterial Agents
Bacterial Proteins

Word Cloud

Created with Highcharts 10.0.0antibacterialactivitiesAMPsUVsuperiorbacteriaantimicrobialpeptidesshowedgenomecandidatescell-freesupernatantclonedBACKGROUND:gammaradiation-tolerantbacteriumreportedvarietypathogenicproductionnothingknownMETHODS/RESULTS:studygenomictranscriptomicdatacontains11genedesignatedNB_AMP1NB_AMP11expresseddifferentlylogarithmicgrowthstationaryphaseMoreoverDH5αstrainscontainingexceptNB_AMP5NB_AMP7exhibitedGram-negativeGram-positiveSyntheticsupportedparticularsyntheticNB_AMP2CONCLUSIONS:AltogetherresultssuggestmayfunctioneffectivelycausingcellularlysisporeformationbacterialmembraneIdentificationAntimicrobialPeptidesGammaRadiationTolerantBacteriumpeptidetranscriptome

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