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Found 13,393 results

Filters: scRNA‐seq

TAS-Seq: a robust and sensitive amplification method for bead-based scRNA-seq
Shichino, S.; Ueha, S.; Hashimoto, S.; Ogawa, T.; Aoki, H.; Wu, B.; Chen, C.-Y.; Kitabatake, M.; Ouji-Sageshima, N.; Hontsu, S.; Sawabata, N.; Kawaguchi, T.; Okayama, T.; Sugihara, E.; Ito, T.; Iwata, Y.; Wada, T.; Ikeo, K.; Sato, T.-a.; Matsushima, K.
biorxiv. 2022-04-09. Preprint
Source:biorxiv
PPRID: 10.1101/2021.08.03.454735v2 doi:NA
Explainable t-SNE for single-cell RNA-seq data analysis
Han, H.; Zhang, T.; Benton, M. L.; Li, C.; Wang, J.; Li, J.
biorxiv. 2022-01-13. Preprint
Source:biorxiv
PPRID: 10.1101/2022.01.12.476084v1 doi:NA
TAS-Seq: a robust and sensitive amplification method for beads-based scRNA-seq
Shichino, S.; Ueha, S.; Hashimoto, S.; Ogawa, T.; Aoki, H.; Wu, B.; Chen, C.-Y.; Kitabatake, M.; Ouji-Sageshima, N.; Hontsu, S.; Sawabata, N.; Kawaguchi, T.; Okayama, T.; Sugihara, E.; Ito, T.; Ikeo, K.; Sato, T.-a.; Matsushima, K.
biorxiv. 2021-08-04. Preprint
Source:biorxiv
PPRID: 10.1101/2021.08.03.454735v1 doi:NA
scBoolSeq: Linking scRNA-Seq Statistics and Boolean Dynamics
Magna Lopez, G.; Calzone, L.; Zinovyev, A.; Pauleve, L.
biorxiv. 2023-10-25. Preprint
Source:biorxiv
PPRID: 10.1101/2023.10.23.563518v1 doi:NA
scSwinFormer: A Transformer-Based Cell-Type Annotation Method for scRNA-Seq Data Using Smooth Gene Embedding and Global Features.
Hengyu Qin, Xiumin Shi, Han Zhou
J Chem Inf Model. Aug 26, 2024.64(16):6316-6323 Print-Electronic
Source:PubMed
PMID: 39101690 doi:10.1021/acs.jcim.4c00616
Sort-Seq: immune repertoire-based scRNA-Seq systematization
Kriukova, V. V.; Lukyanov, D. K.; Shagina, I. A.; Sharonov, G. V.; Lupyr, K. R.; Blagodatskikh, K. A.; Staroverov, D. B.; Ladell, K.; Miners, K. L.; Salnikova, M. A.; Nikolaev, R. V.; Shelikhova, L.; Maschan, M. A.; Britanova, O. V.; Franke, A.; Price, D. A.; Chudakov, D. M.
biorxiv. 2023-10-27. Preprint
Source:biorxiv
PPRID: 10.1101/2023.10.24.563704v1 doi:NA
Obstacles to Studying Alternative Splicing Using scRNA-seq
Westoby, J.; Artemov, P.; Hemberg, M.; Ferguson-Smith, A. C.
biorxiv. 2019-10-08. Preprint
Source:biorxiv
PPRID: 10.1101/797951v1 doi:NA
Alignment of single-cell RNA-seq samples without over-correction using kernel density matching
Chen, M.; Zhan, Q.; Mu, Z.; Wang, L.; Zheng, Z.; Miao, J.; Zhu, P.; Li, Y. I.
biorxiv. 2020-01-06. Preprint
Source:biorxiv
PPRID: 10.1101/2020.01.05.895136v1 doi:10.1101/gr.261115.120
Robustness and applicability of functional genomics tools on scRNA-seq data
Holland, C. H.; Tanevski, J.; Gleixner, J.; Kumar, M. P.; Mereu, E.; Perales-Paton, J.; Joughin, B. A.; Stegle, O.; Lauffenburger, D. A.; Heyn, H.; Szalai, B.; Saez-Rodriguez, J.
biorxiv. 2019-09-01. Preprint
Source:biorxiv
PPRID: 10.1101/753319v1 doi:10.1186/s13059-020-1949-z
Identification of cell barcodes from long-read single-cell RNA-seq with BLAZE
You, Y.; Prawer, Y. D. J.; Paoli-Iseppi, R. D.; Hunt, C. P. J.; Parish, C. L.; Shim, H.; Clark, M. B.
biorxiv. 2022-08-16. Preprint
Source:biorxiv
PPRID: 10.1101/2022.08.16.504056v1 doi:NA
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