Lin Liu
LncRNA Resources
Email: liulin (AT) big.ac.cn
Tel:
LncRNA Resources
Email: liulin (AT) big.ac.cn
Tel:
· PhD in Bioinformatics, Beijing Institute of Genomics, Chinese Academy of Sciences, China, 2017-2021
· MS in Bioinformatics, Beijing Institute of Genomics, Chinese Academy of Sciences, China, 2015-2017
· BS in Bioinformatics, Harbin Medical University, China, 2010-2015
· Brain Disease Research
· LncRNA Research
· BrainBase (a curated knowledgebase of brain diseases)
· LncRNAWiki 1.0 (a wiki-based database for community curation of human lncRNAs)
· LncRNAWiki 2.0 (community-curation of lncRNAs)
· LncBook (a curated knowledgebase of human long non-coding RNAs, Top ten bioinformatics databases of China in 2019)
· LncExpDB (expression database of human long non-coding RNAs)
· Database Commons (a curated catalogue of biological databases)
· Reviewer: Briefings in Bioinformatics
· Poster: 第十届全国生物信息学与系统生物学学术大会，2021，四川，中国
· Talk: 第二届 “精准医学前沿” 研究生学术论坛，2020，北京，中国
· Talk: The 4th Big Forum for Life and Health Sciences, 2019, Beijing, China
· Volunteer: The 4th Big Forum for Life and Health Sciences, 2019, Beijing, China
· Volunteer: The 3rd Big Forum for Life and Health Sciences, 2018, Beijing, China
· Volunteer: The 2nd Big Forum for Life and Health Sciences, 2017, Beijing, China
· Volunteer: The Workshop on DNA Methylation and Precision Medicine, 2017, Beijing, China
· 2021-06 Excellent graduate, University of Chinese Academy of Sciences
· 2020-10 The "2020 National Scholarship for Doctoral Student"
· 2019-06 The "Triple-A Student" in the University of Chinese Academy of Science
1. Li Z#, Liu L#, Feng C#, Qin Y, Xiao J, Zhang Z*, Ma L*. LncBook 2.0: integrating human long non-coding RNAs with multi-omics annotations. Nucleic Acids Res 2023, 51(D1):D186- D191. [PMID=36330950]
2. Liu L# as co-first author in CNCB-NGDC Members & Partners: Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2023. Nucleic Acids Res 2023, 51(D1):D18-D28. [PMID=36420893]
3. Ma L#,*, Zou D#, Liu L#, Shireen H, Abbasi AA, Bateman A, Xiao J, Zhao W, Bao Y, Zhang Z*. Database Commons: A Catalog of Worldwide Biological Databases. Genomics Proteomics Bioinformatics. 2022 Dec 23:S1672-0229(22)00169-3. doi: 10.1016/j.gpb.2022.12.004. Epub ahead of print. [PMID=36572336]
4. Liu L#, Zhao Li#, Chang Liu#, Dong Zou, Qianpeng Li, Changrui Feng, Wei Jing, Sicheng Luo, Zhang Zhang*, Lina Ma*:
LncRNAWiki 2.0: a knowledgebase of human long non- coding RNAs with
enhanced curation model and database system. Nucleic Acids Res 2022, 50(D1):D190-D195. [PMID=34751395]
5. Liu L#, Yang Zhang#, Guangyi Niu#,
Qianpeng Li, Zhao Li, Tongtong Zhu, Changrui Feng, Xiaonan Liu,
Yuansheng Zhang, Tianyi Xu, Ruru Chen, Xufei Teng, Rongqin Zhang, Dong
Zou, Lina Ma*, Zhang Zhang*: BrainBase: a curated knowledgebase for brain diseases. Nucleic Acids Res 2022, 50(D1):D1131-D1138. [PMID=34718720]
6. Liu L# as co-first author in CNCB-NGDC Members and Partners: Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022. Nucleic Acids Res 2022, 50(D1):D27-D38. [PMID=34718731]
7. Liu L# as co-first author in BIG Data Center Members. Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2021. Nucleic Acids Res 2021, in press. doi: 10.1093/nar/gkaa1022. [PubMed=33175170]
8．Li Z#, Liu L#, Jiang S, Li QP, Feng CR, Du Q, Zou D, Xiao JF, Zhang Z*, Ma LN*: LncExpDB: an expression database of human long non-coding RNAs. Nucleic Acids Research 2021 , doi: 10.1093/nar/gkaa850. [PubMed=33045751]
9. Liu L#, Wang GY#, Wang LG, Yu CL, Li MW, Song SH, Hao LL, Ma LN*, Zhang Z*: Computational identification and characterization of glioma candidate biomarkers through multi-omics integrative profiling. Biology Direct, 2020, 15: 10. [PubMed=32539851]
10. Liu L# as co-first author in National Genomics Data Center Members and Partners: Database resources of the National Genomics Data Center in 2020. Nucleic Acids Research, 2020, 48(D1): D24-D33. [PubMed=31702008]
11. Sang J#, Zou D#, Wang Z, Wang F, Zhang Y, Xia L, Li Z, Ma LN, Li M, Xu BX Liu X, Wu S, Liu L, Niu G, Li M, Luo Y, Hu S, Hao L, Zhang Z: IC4R-2.0: Rice genome reannotation using massive RNA-Seq data. Genomics Proteomics & Bioinformatics, 2020. [PubMed=32683045]
12. Ma LN#, Cao J#, Liu L#, Du Q, Li Z, Zou D, Bajic VB, Zhang Z*: LncBook: a curated knowledgebase of human long non-coding RNAs. Nucleic Acids Research, 2019, 47: D128-D134. [PubMed=30329098]
13. Ma LN*,Cao J#, Liu L#, Li Z, Shireen H, Pervaiz N, Batool F, Raza R, Zou D, Bao YM, Abbasi AA, Zhang Z*: Community curation and expert curation of human long non-coding RNAs. Current Protocols in Bioinformatics, 2019, 67(1): e82. [PubMed=31524988]
14. Liu L# as co-first author in BIG Data Center Members: Database resources of the BIG Data Center in 2019. Nucleic Acids Research, 2019, 47(D1): D8-D14. [PubMed=30365034]
15. Niu G#, Zou D#, Li M#, Zhang Y, Sang J, Xia L, Li M, Liu L, Cao J, Zhang Y, Wang P, Hu S, Hao L, Zhang Z: Editome Disease Knowledgebase (EDK): A curated knowledgebase of editome-disease associations in human. Nucleic Acids Research, 2019, 47(D1): D78-D83.[PubMed=30357418]
16. Liu L listed in Database Resources of the BIG Data Center in 2018. Nucleic Acids Research, 2018, 46(D1): D14-D20. [PubMed=29036542]
17. Zhang YS, Xia L, Sang J, Li M, Liu L, Li MW, Niu GY, Cao JB, Teng XF, Zhou Q, Zhang Z: The BIG Data Center’s database resources. Yi Chuan, 2018, 40 (11): 1039-1043.[PubMed=30465537]
18. Liu L listed in BIG Data Center Members: The BIG Data Center: from deposition to integration to translation. Nucleic Acids Research, 2017, 45(D1): D18-D24. [PubMed=27899658]
19. Sun J, Shi H, Wang Z, Zhang C, Liu L, Wang L, He W, Hao D, Liu S, Zhou M:Inferring novel lncRNA-disease associations based on a random walk model of a lncRNA functional similarity network.Mol Biosyst.2014 Aug;10(8):2074-81.[PubMed=24850297]
20. 朱银领,刘琳,段斌,等.构建编码基因-非编码RNA调控网络挖掘前列腺癌潜在致病因子.《国际遗传学杂志》,2016,39(4):181-185