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Shuai Jiang
Shuai Jiang

Associate Professor

Email: jiangs (AT) big.ac.cn

Tel: +86 (10) 8409-7845

PROFESSIONAL EXPERIENCE

  • Research assistant professor, Beijing Institute of Genomics, Chinese Academy of Sciences (CAS), China, 2020.01−2023.05

  • Research associate professor, Beijing Institute of Genomics, Chinese Academy of Sciences (CAS), China, 2023.05−Present

 

EDUCATION

  • Peking University   2014.07-2020.01 Bioinformatics      PhD

  • China Agricultural University       2010.09-2014.07 Electronic Information Engineering  Bachelor


PUBLICATIONS

1. Jiang, S.#, Qian, Q.#, Zhu, T.#, Zong, W., Shang, Y., Jin, T., Zhang, Y., Chen, M., Wu, Z., Chu, Y. et al. (2023) Cell Taxonomy: a curated repository of cell types with multifaceted characterization. Nucleic Acids Res, 51, D853-D860.

 

2. Jiang, S.#, Du, Q.#, Feng, C.#, Ma, L.* and Zhang, Z.* (2022) CompoDynamics: a comprehensive database for characterizing sequence composition dynamics. Nucleic Acids Res, 50, D962-D969.

 

3. Jiang, S.#, Cheng, S.J.#, Ren, L.C., Wang, Q., Kang, Y.J., Ding, Y., Hou, M., Yang, X.X., Lin, Y., Liang, N. et al. (2019) An expanded landscape of human long noncoding RNA. Nucleic Acids Res, 47, 7842-7856.

 

4. Gong, Z.#, Zhu, J.W.#, Li, C.P.#, Jiang, S.#, Ma, L.N., Tang, B.X., Zou, D., Chen, M.L., Sun, Y.B., Song, S.H. et al. (2020) An online coronavirus analysis platform from the National Genomics Data Center. Zool Res, 41, 705-708.

 

5. Shuai Jiang as co-first author in CNCB-NGDC member. (2023) Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2023. Nucleic Acids Res, 51, D18-D28.

 

6. Shuai Jiang as co-first author in CNCB-NGDC member. (2022) Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022. Nucleic Acids Res, 50, D27-D38.

 

7. Shuai Jiang as co-first author in CNCB-NGDC member. (2021) Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2021. Nucleic Acids Res, 49, D18-D28.

 

8. Ma, Y., Chen, M., Bao, Y., Song, S. and MPoxVR Team. (2022) MPoxVR: A comprehensive genomic resource for monkeypox virus variant surveillance. Innovation (Camb), 3, 100296.

 

9. Li Z., Liu L., Jiang S., Li Q., Feng C., Du Q., Zou D., Xiao J., Zhang Z., Ma L. (2021) LncExpDB: an expression database of human long non-coding RNAs. Nucleic Acids Res,49,D962-D968.

 

10. Li, Q.#, Li, Z.#, Feng, C., Jiang, S., Zhang, Z*. and Ma, L*. (2020) Multi-omics annotation of human long non-coding RNAs. Biochem Soc Trans, 48, 1545-1556.

 

11. Cheng, S.J., Jiang, S., Shi, F.Y., Ding, Y. and Gao, G.* (2018) Systematic identification and annotation of multiple-variant compound effects at transcription factor binding sites in human genome, Journal of Genetics and Genomics, 45: 373-379.

 

12. Hou, M., Tian, F., Jiang, S., Kong, L., Yang, D. and Gao, G.* (2016) LocExpress: a web server for efficiently estimating expression of novel transcripts, BMC Genomics, 17: 1023.

 

13. Cheng, S.J., Shi, F.Y., Liu, H., Ding, Y., Jiang, S., Liang, N. and Gao, G.* (2017) Accurately annotate compound effects of genetic variants using a context-sensitive framework, Nucleic Acids Research, 45: e82.

 

14. Shao, Y.#, Chen, C.#, Shen, H., He, B.Z., Yu, D., Jiang, S., Zhao, S., Gao, Z., Zhu, Z., Chen, X., Fu, Y., Chen, H., Gao, G., Long, M.Y. and Zhang, Y.* (2019) GenTree, an integrated resource for analyzing the evolution and function of primate-specific coding genes, Genome Research, 29: 682-696

 

15. Zhou, Z., Ren, L., Zhang, L., Zhong, J., Xiao, Y., Jia, Z., Guo, L., Yang, J., Wang, C., Jiang, S. et al. (2020) Heightened Innate Immune Responses in the Respiratory Tract of COVID-19 Patients. Cell Host Microbe, 27, 883-890 e882.

 

16. Song,S.#, Ma, L.#, Zou, D.#, Tian, D., Li, C., Zhu, J., Chen, M., Wang, A., Ma, Y., Li, M., Teng, X., Cui, Y., Duan, G., Zhang, M., Jin, T., Shi, C., Du, Z., Zhang, Y., Liu, C., Li, R., Zeng, J., Hao, L., Jiang, S., Chen, H., Han, D., Xiao, J., Zhang, Z., Zhao, W., Xue, Y., Bao, Y. (2020) The global landscape of SARS-CoV-2 genomes, variants, and haplotypes in 2019nCoVR. Genomics Proteomics Bioinformatics,18, 749-759.