Tongtong Zhu
PhD Candidate
Gene Expression Nebulas
Email: zhutt (AT) big.ac.cn
Tel: 13621152071
Gene Expression Nebulas
Email: zhutt (AT) big.ac.cn
Tel: 13621152071
EDUCATION
· PhD in Bioinformatics, Beijing Institute of Genomics, Chinese Academy of Sciences, China, 2025 (expected)
· BS in Bioinformatics, Harbin Medical University, China, 2019
RESEARCH INTERESTS
· RNA Editing in Human Disease
· High-throughput Transcriptome Sequencing Data Analysis
· Bioinformatics Tools Development
· Machine Learning and Deep Mining
· Single Cell RNA-seq Analysis
PROJECTS & RESOURCES
· Editome Disease Knowledgebase
· HemAtlas
PUBLICATIONS
2023
· Zhu, T, Niu, G, Zhang, Y, Chen, M, Li, C. Y, Hao, L*, & Zhang, Z*. Host-mediated RNA editing in viruses. Biology Direct. 2023. [PMID: 36978112]
· Jiang, S#, Qian, Q#, Zhu, T#, Zong, W, Shang, Y, Jin, T, Zhang, Y, Chen, M, Wu, Z, Chu, Y, Zhang, R, Luo, S, Jing, W, Zou, D, Bao, Y, Xiao, J*, & Zhang, Z*. Cell Taxonomy: a curated repository of cell types with multifaceted characterization. Nucleic Acids Research. 2023. [PMID: 36161321]
· Zhu T# as co-first author in CNCB-NGDC Members & Partners. Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2023. Nucleic Acids Research. 2023. [PMID: 36420893]
2022
· Zhang Y#, Zou D#, Zhu T#, Xu T#, Chen M#, Niu G, Zong W, Pan R, Jing W, Sang J, Liu C, Xiong Y, Sun Y, Zhai S, Chen H, Zhao W, Xiao J, Bao Y, Hao L*, Zhang Z*: Gene Expression Nebulas (GEN): a comprehensive data portal integrating transcriptomic profiles across multiple species at both bulk and single-cell levels. Nucleic Acids Research. 2022. [PMID: 34591957]
· Liu L, Zhang Y, Niu G, Li Q, Li Z, Zhu T, Feng C, Liu X, Zhang Y, Xu T, Chen R, Teng X, Zhang R, Zou D, Ma L*, Zhang Z*. BrainBase: a curated knowledgebase for brain diseases. Nucleic Acids Research. 2022. [PMID: 34718720]
· Zhu T# as co-first author in CNCB-NGDC Members & Partners. Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022. Nucleic Acids Research. 2022. [PMID: 34718731]
2021
· Zhu T# as co-first author in CNCB-NGDC Members & Partners. Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2021. Nucleic Acids Research. 2021. [PMID:33175170]
2020
· Zhu T listed in BIG Data Center Members: Database Resources of the National Genomics Data Center in 2020. Nucleic Acids Research. 2020. [PMID:31702008]
2019
· Zhu T#, Gao Y#, Wang J#, Li X, Shang S, Wang Y, Guo S, Zhou H, Liu H, Sun D, Chen H, Wang L, Ning S*. CancerClock: A DNA Methylation Age Predictor to Identify and Characterize Aging Clock in Pan-Cancer. Front Bioeng Biotechnol. 2019. [PMID: 31867319]