Zhuang Xiong

PhD Candidate

Email: xiongzhuang17m (AT) big.ac.cn

Tel: +86 176-0010-4278

EDUCATION

  • PhD in Bioinformatics, Beijing Institute of Genomics, Chinese Academy of Sciences, China, 2023 (expected) 

  • BS in Bioinformatics, Huazhong University of Science and Technology, China, 2017


RESEARCH INTERESTS

  • DNA methylation data integration and normalization

  • Epigenome-Wide Association Study in human traits

  • Online data visualization for omics data


PROJECTS & RESOURCES

  • EWAS Open Platform: A comprehensive analysis suite that integrates EWAS Atlas, EWAS Data Hub and EWAS Toolkit for epigenome-wide association studies.

       1、EWAS Data Hub : A data hub of DNA methylation array data and metadata.

       2、EWAS Atlas : A knowledgebase of epigenome-wide association studies.

       3、EWAS Toolkit : A web toolkit for epigenome-wide association study.

  • GMQN : A reference based method for correcting batch effects as well as probe bias in Illumina BeadChips.


ACADEMIC ACTIVITIES

PUBLICATIONS

  1. Xiong Z#, Yang F#, Li M#, Ma Y, Zhao W, Wang G, Li Z, Zheng X, Zou D, Zong W, Kang H, Jia Y, Li R*,  Zhang Z*, Bao Y*: EWAS Open Platform: integrated data, knowledge and toolkit for epigenome-wide association study. Nucleic Acids Res 2022  [PMID=34718752]


  2. Xiong Z#, Li M#, Yang F#, Ma Y, Sang J, Li R, Li Z, Zhang Z*, Bao Y*EWAS Data Hub: a resource of DNA methylation array data and metadata. Nucleic Acids Res 2020  [PMID=31584095]


  3. Xiong Z#, Li M#, Ma Y, LI R, Bao Y*: GMQN: A reference-based method for correcting batch effects as well as probes bias in HumanMethylation BeadChip.  bioRxiv 2021, doi: https://doi.org/10.1101/2021.09.06.459116


  4. Xiong Zas the co-first author in CNCB-NGDC Members and Partners: Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022. Nucleic Acids Res 2022  [PMID=34718731]


  5. Xiong Zas the co-first author in CNCB-NGDC Members and Partners: Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2021. Nucleic Acids Res 2021  [PMID=33175170]


  6. Xiong Z# as the co-first author in BIG Data Center Members: Database Resources of the National Genomics Data Center in 2020.  Nucleic Acids Res 2020 [PMID=31702008]


  7. Zong W#, Kang H#, Xiong Z, MA Y, Jin T, Gong Z, Yi L, Zhang M, Wu S, Wang G, Bao Y*, Li R*: scMethBank: a database for single-cell whole genome DNA methylation maps. Nucleic Acids Res 2020  [PMID=34570235]