SugarcaneOmics
The SugarCane multi-Omics Database
SugarcaneOmics
The SugarCane multi-Omics Database
Genome
| Species | DNA (FASTA) | Gene (FASTA) | CDS (FASTA) | Protein (FASTA) | Annotation (GFF3) |
|---|
Gene Expression
| Dataset ID | Reference | BioProject ID | Species | Download |
|---|
Genetic Variation (322 varieties)
| Reference | SNP (VCF) | SNP (VCF with Genotype) | SNP (FASTA) | InDel (VCF) | InDel (VCF with Genotype) | InDel (FASTA) | Annotation (VEP) |
|---|---|---|---|---|---|---|---|
| S. spontaneum Np-X | Brief VCF | Detailed VCF | FASTA | Brief VCF | Detailed VCF | FASTA | Np-X-322.annotation.vep.txt.gz |
Transcription Factor
| Organism (Genome) | TF list | Protein sequences |
|---|