Variation ID : sbi33825296

Variation Detail



Variation ID sbi33825296
Type INDEL
Position Chr01 3082-3100
Ref /Alleles TTCGCCCGTGGAAATAAAC/ * or T
MAF *: 0.043
5' Flank TGTGGAAATAAACGCAGATTGACGAATCGT
3' Flank TCGCCCGTCGAAGTCGCAAGTCGCTCTTTA

Individual Alleles

id Sample Id Type Alleles
1 101 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
2 103 Improved TTCGCCCGTGGAAATAAAC|*
3 107 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
4 11 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
5 110 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
6 123 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
7 131 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
8 132 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
9 135 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
10 137 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
11 138 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
12 14 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
13 140 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
14 141 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
15 144 Improved TTCGCCCGTGGAAATAAAC|*
16 150 Improved TTCGCCCGTGGAAATAAAC|*
17 154 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
18 159 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
19 16 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
20 161 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
21 167 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
22 168 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
23 170 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
24 173 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
25 175 Improved TTCGCCCGTGGAAATAAAC|*
26 176 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
27 182 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
28 186 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
29 190 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
30 192 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
31 194 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
32 195 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
33 197 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
34 J22 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
35 J26 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
36 J5 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
37 J50 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
38 2001 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
39 2005 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
40 2008 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
41 2009 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
42 201 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
43 2010 Landrace TTCGCCCGTGGAAATAAAC|*
44 2016 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
45 2019 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
46 202 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
47 2021 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
48 2023 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
49 2026 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
50 2029 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
51 2030 Landrace TTCGCCCGTGGAAATAAAC|*
52 2031 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
53 2036 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
54 2037 Improved TTCGCCCGTGGAAATAAAC|*
55 2038 Improved TTCGCCCGTGGAAATAAAC|*
56 2039 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
57 204 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
58 2042 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
59 2043 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
60 2048 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
61 2049 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
62 205 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
63 2050 Improved N|N
64 2052 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
65 2054 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
66 2056 Improved N|N
67 2059 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
68 206 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
69 2064 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
70 2065 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
71 2067 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
72 2068 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
73 2069 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
74 2071 Improved TTCGCCCGTGGAAATAAAC|*
75 2074 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
76 2075 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
77 2076 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
78 2080 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
79 2081 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
80 2082 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
81 2086 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
82 2088 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
83 260 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
84 261 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
85 262 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
86 263 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
87 286 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
88 29 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
89 3 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
90 302546 S.propinquum N|N
91 31 Improved TTCGCCCGTGGAAATAAAC|*
92 32 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
93 34 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
94 346 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
95 348 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
96 353 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
97 355 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
98 357 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
99 364 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
100 367 Landrace N|N
101 s37 S.propinquum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
102 s38 S.propinquum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
103 370 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
104 377 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
105 392 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
106 394 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
107 40 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
108 42 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
109 43 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
110 45 Improved TTCGCCCGTGGAAATAAAC|*
111 47 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
112 48 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
113 51 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
114 53 Improved TTCGCCCGTGGAAATAAAC|*
115 56 Improved N|N
116 61 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
117 62 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
118 66 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
119 67 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
120 68 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
121 70 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
122 73 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
123 75 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
124 88 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
125 89 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
126 91 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
127 92 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
128 93 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
129 94 Improved TTCGCCCGTGGAAATAAAC|*
130 95 Improved TTCGCCCGTGGAAATAAAC|*
131 96 Improved TTCGCCCGTGGAAATAAAC|*
132 97 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
133 s1 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
134 s36 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
135 s2 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
136 s3 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
137 s32 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
138 s43 Weedy TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
139 s40 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
140 s41 Weedy TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
141 s39 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
142 s42 Landrace TTCGCCCGTGGAAATAAAC|*
143 s47 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
144 s5 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
145 GW102 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
146 GW103 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
147 GW104 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
148 GW105 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
149 GW16 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
150 GW2 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
151 GW34 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
152 GW37 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
153 GW58 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
154 GW59 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
155 GW9 Landrace N|N
156 s4 Weedy TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
157 s6 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
158 s7 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
159 s8 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
160 s9 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
161 J101 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
162 J103 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
163 J112 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
164 J113 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
165 J129 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
166 J130 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
167 J136 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
168 J152 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
169 J2 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
170 J20 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
171 J4 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
172 J42 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
173 J44 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
174 J49 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
175 J52 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
176 J53 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
177 J54 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
178 J57 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
179 J59 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
180 J64 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
181 J66 Landrace N|N
182 J67 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
183 J69 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
184 J87 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
185 J99 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
186 s45 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
187 s11 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
188 s10 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
189 s46 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
190 s12 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
191 s13 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
192 MHMD Landrace TTCGCCCGTGGAAATAAAC|*
193 s14 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
194 s15 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
195 s34 Weedy TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
196 s33 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
197 s21 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
198 s16 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
199 s44 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
200 s35 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
201 s31 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
202 s17 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
203 s18 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
204 s20 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
205 s19 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
206 s22 Landrace TTCGCCCGTGGAAATAAAC|*
207 s23 Landrace TTCGCCCGTGGAAATAAAC|*
208 s24 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
209 s25 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
210 s26 Landrace TTCGCCCGTGGAAATAAAC|*
211 s27 Landrace TTCGCCCGTGGAAATAAAC|*
212 s28 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
213 s29 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
214 s30 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
215 SL25 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
216 SL105 Wild sorghum N|N
217 SL108 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
218 SL109 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
219 SL12 Wild sorghum N|N
220 SL129 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
221 SL130 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
222 SL135 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
223 SL136 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
224 SL137 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
225 SL138 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
226 SL140 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
227 SL141 Wild sorghum TTCGCCCGTGGAAATAAAC|T
228 SL19 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
229 SL28 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
230 SL32 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
231 SL35 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
232 SL36 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
233 SL37 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
234 SL39 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
235 SL41 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
236 SL43 Wild sorghum N|N
237 SL47 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
238 SL49 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
239 SL51 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
240 SL53 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
241 SL62 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
242 SL83 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
243 SL97 Landrace N|N
244 s48 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
245 Tu13 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
246 Tu14 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
247 Tu30 Wild sorghum TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
248 Tu5 Wild sorghum N|N
249 WSC5 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
250 WSC15 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
251 WSC19 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
252 WSC30 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
253 WSC52 Landrace N|N
254 WSC6 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
255 WSC61 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
256 WSC71 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
257 WSC72 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
258 WSC79 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
259 WSC94 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
260 WSC99 Landrace TTCGCCCGTGGAAATAAAC|*
261 WSC100 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
262 WSC104 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
263 WSC105 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
264 WSC12 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
265 WSC13 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
266 WSC16 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
267 WSC17 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
268 WSC18 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
269 WSC20 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
270 WSC24 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
271 WSC25 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
272 WSC29 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
273 WSC31 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
274 WSC32 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
275 WSC34 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
276 WSC38 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
277 WSC39 Improved TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
278 WSC40 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
279 WSC54 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
280 WSC56 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
281 WSC59 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
282 WSC68 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
283 WSC70 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
284 WSC73 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
285 WSC81 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
286 WSC85 Improved TTCGCCCGTGGAAATAAAC|*
287 WSC91 Landrace TTCGCCCGTGGAAATAAAC|*
288 WSC93 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC
289 WSC98 Landrace TTCGCCCGTGGAAATAAAC|TTCGCCCGTGGAAATAAAC

Alleles Distribution

Gene Annotation



Variation ID Gene Consequence Transcript Type cDNA Source/target codon Protein Name protein pos source/target Amino acid
sbi33825296 Sobic.001G000100 downstream gene variant |MODIFIER Sobic.001G000100.1 mRNA Sobic.001G000100.1.p

Genome Browser