Variation ID : sbi33825297

Variation Detail



Variation ID sbi33825297
Type INDEL
Position Chr01 3110-3139
Ref /Alleles GAAGTCGCAAGTCGCTCTTTAGCAATCACT/ G or *
MAF *: 0.043
5' Flank GTTTCGCCCGTGGAAATAAACTCGCCCGTC
3' Flank AGCATACAGAGGTACTATACACCCTTTGTC

Individual Alleles

id Sample Id Type Alleles
1 101 Improved N|N
2 103 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|*
3 107 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
4 11 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
5 110 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
6 123 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
7 131 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
8 132 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
9 135 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
10 137 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
11 138 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
12 14 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
13 140 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
14 141 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
15 144 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|*
16 150 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|*
17 154 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
18 159 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
19 16 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
20 161 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
21 167 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
22 168 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
23 170 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
24 173 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
25 175 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|*
26 176 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
27 182 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
28 186 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
29 190 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
30 192 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
31 194 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
32 195 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
33 197 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
34 J22 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
35 J26 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
36 J5 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
37 J50 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
38 2001 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
39 2005 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
40 2008 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
41 2009 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
42 201 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
43 2010 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|*
44 2016 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
45 2019 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
46 202 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
47 2021 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
48 2023 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
49 2026 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
50 2029 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
51 2030 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|*
52 2031 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
53 2036 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
54 2037 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|*
55 2038 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|*
56 2039 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
57 204 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
58 2042 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
59 2043 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
60 2048 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
61 2049 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
62 205 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
63 2050 Improved N|N
64 2052 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
65 2054 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
66 2056 Improved N|N
67 2059 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
68 206 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
69 2064 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
70 2065 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
71 2067 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
72 2068 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
73 2069 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
74 2071 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|*
75 2074 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
76 2075 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
77 2076 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
78 2080 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
79 2081 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
80 2082 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
81 2086 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
82 2088 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
83 260 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
84 261 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
85 262 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
86 263 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
87 286 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
88 29 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
89 3 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
90 302546 S.propinquum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
91 31 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|*
92 32 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
93 34 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
94 346 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
95 348 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
96 353 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
97 355 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
98 357 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
99 364 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
100 367 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
101 s37 S.propinquum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
102 s38 S.propinquum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
103 370 Landrace N|N
104 377 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
105 392 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
106 394 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
107 40 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
108 42 Improved N|N
109 43 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
110 45 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|*
111 47 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
112 48 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
113 51 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
114 53 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|*
115 56 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
116 61 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
117 62 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
118 66 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
119 67 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
120 68 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
121 70 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
122 73 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
123 75 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
124 88 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
125 89 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
126 91 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
127 92 Improved N|N
128 93 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
129 94 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|*
130 95 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|*
131 96 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|*
132 97 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
133 s1 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
134 s36 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
135 s2 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
136 s3 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
137 s32 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
138 s43 Weedy GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
139 s40 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
140 s41 Weedy GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
141 s39 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
142 s42 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|*
143 s47 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
144 s5 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
145 GW102 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
146 GW103 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
147 GW104 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
148 GW105 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
149 GW16 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
150 GW2 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
151 GW34 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
152 GW37 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
153 GW58 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
154 GW59 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
155 GW9 Landrace N|N
156 s4 Weedy GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
157 s6 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
158 s7 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
159 s8 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
160 s9 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
161 J101 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
162 J103 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
163 J112 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
164 J113 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
165 J129 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
166 J130 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
167 J136 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
168 J152 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
169 J2 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
170 J20 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
171 J4 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
172 J42 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
173 J44 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
174 J49 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
175 J52 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
176 J53 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
177 J54 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
178 J57 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
179 J59 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
180 J64 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
181 J66 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
182 J67 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
183 J69 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
184 J87 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
185 J99 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
186 s45 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
187 s11 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
188 s10 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
189 s46 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
190 s12 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
191 s13 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
192 MHMD Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|*
193 s14 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
194 s15 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
195 s34 Weedy GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
196 s33 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
197 s21 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
198 s16 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
199 s44 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
200 s35 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
201 s31 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
202 s17 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
203 s18 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
204 s20 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
205 s19 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
206 s22 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|*
207 s23 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|*
208 s24 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
209 s25 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
210 s26 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|*
211 s27 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|*
212 s28 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
213 s29 Landrace G|G
214 s30 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
215 SL25 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
216 SL105 Wild sorghum N|N
217 SL108 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
218 SL109 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
219 SL12 Wild sorghum N|N
220 SL129 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
221 SL130 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
222 SL135 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
223 SL136 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
224 SL137 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
225 SL138 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
226 SL140 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
227 SL141 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
228 SL19 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
229 SL28 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
230 SL32 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
231 SL35 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
232 SL36 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
233 SL37 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
234 SL39 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
235 SL41 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
236 SL43 Wild sorghum N|N
237 SL47 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
238 SL49 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
239 SL51 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
240 SL53 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
241 SL62 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
242 SL83 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
243 SL97 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
244 s48 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
245 Tu13 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
246 Tu14 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
247 Tu30 Wild sorghum GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
248 Tu5 Wild sorghum N|N
249 WSC5 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
250 WSC15 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
251 WSC19 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
252 WSC30 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
253 WSC52 Landrace N|N
254 WSC6 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
255 WSC61 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
256 WSC71 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
257 WSC72 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
258 WSC79 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
259 WSC94 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
260 WSC99 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|*
261 WSC100 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
262 WSC104 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
263 WSC105 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
264 WSC12 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
265 WSC13 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
266 WSC16 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
267 WSC17 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
268 WSC18 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
269 WSC20 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
270 WSC24 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
271 WSC25 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
272 WSC29 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
273 WSC31 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
274 WSC32 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
275 WSC34 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
276 WSC38 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
277 WSC39 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
278 WSC40 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
279 WSC54 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
280 WSC56 Landrace N|N
281 WSC59 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
282 WSC68 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
283 WSC70 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
284 WSC73 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
285 WSC81 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
286 WSC85 Improved GAAGTCGCAAGTCGCTCTTTAGCAATCACT|*
287 WSC91 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|*
288 WSC93 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT
289 WSC98 Landrace GAAGTCGCAAGTCGCTCTTTAGCAATCACT|GAAGTCGCAAGTCGCTCTTTAGCAATCACT

Alleles Distribution

Gene Annotation



Variation ID Gene Consequence Transcript Type cDNA Source/target codon Protein Name protein pos source/target Amino acid
sbi33825297 Sobic.001G000100 downstream gene variant |MODIFIER Sobic.001G000100.1 mRNA Sobic.001G000100.1.p

Genome Browser