chr rs ps n_miss allele1 allele0 af beta se logl_H1 l_remle p_wald 1 Chr01_467402 467402 0 C T 0.122 2.563988e-02 5.114877e-02 -3.006419e+02 1.000000e-05 6.164414e-01 1 Chr01_502420 502420 0 A G 0.215 4.138530e-02 3.459446e-02 -3.000532e+02 1.000000e-05 2.322681e-01 1 Chr01_586010 586010 8 A T 0.375 -2.556023e-02 2.965994e-02 -3.003966e+02 1.000000e-05 3.893121e-01 1 Chr01_619174 619174 4 T A 0.390 -2.443661e-02 2.927383e-02 -3.004194e+02 1.000000e-05 4.043369e-01 1 Chr01_625873 625873 0 G A 0.385 -2.297399e-02 2.931450e-02 -3.004607e+02 1.000000e-05 4.336621e-01 1 Chr01_637035 637035 1 G A 0.388 -2.542611e-02 2.922626e-02 -3.003895e+02 1.000000e-05 3.848207e-01 1 Chr01_682380 682380 0 G T 0.387 -2.446917e-02 2.926135e-02 -3.004182e+02 1.000000e-05 4.035111e-01 1 Chr01_693433 693433 1 T C 0.388 -2.561575e-02 2.925175e-02 -3.003845e+02 1.000000e-05 3.817034e-01 1 Chr01_714911 714911 0 A T 0.377 -3.082439e-02 2.923342e-02 -3.002124e+02 1.000000e-05 2.923073e-01 1 Chr01_730789 730789 0 A G 0.465 1.522291e-02 2.928224e-02 -3.006325e+02 1.000000e-05 6.034346e-01 1 Chr01_738098 738098 0 C T 0.387 -2.446917e-02 2.926135e-02 -3.004182e+02 1.000000e-05 4.035111e-01 1 Chr01_770445 770445 0 C T 0.387 -2.446917e-02 2.926135e-02 -3.004182e+02 1.000000e-05 4.035111e-01 1 Chr01_777122 777122 0 A G 0.387 -2.446917e-02 2.926135e-02 -3.004182e+02 1.000000e-05 4.035111e-01 1 Chr01_796951 796951 1 G T 0.388 -2.592254e-02 2.926359e-02 -3.003756e+02 1.000000e-05 3.762264e-01 1 Chr01_807598 807598 0 C G 0.387 -2.446917e-02 2.926135e-02 -3.004182e+02 1.000000e-05 4.035111e-01 1 Chr01_823606 823606 0 C T 0.387 -2.446917e-02 2.926135e-02 -3.004182e+02 1.000000e-05 4.035111e-01 1 Chr01_841091 841091 1 T A 0.347 -4.935356e-02 2.969087e-02 -2.993906e+02 1.000000e-05 9.722377e-02 1 Chr01_873984 873984 0 T A 0.254 8.732234e-04 2.969376e-02 -3.007671e+02 1.000000e-05 9.765537e-01 1 Chr01_883841 883841 0 C T 0.303 -1.566428e-02 2.930316e-02 -3.006247e+02 1.000000e-05 5.932428e-01 1 Chr01_897943 897943 3 G A 0.113 -7.012667e-02 4.167983e-02 -2.993570e+02 1.000000e-05 9.322793e-02 1 Chr01_909369 909369 0 A T 0.339 -6.091978e-02 2.839045e-02 -2.984781e+02 1.000000e-05 3.247390e-02 1 Chr01_920133 920133 1 A G 0.340 -6.729980e-02 2.813812e-02 -2.979270e+02 1.000000e-05 1.721509e-02 1 Chr01_934203 934203 0 G C 0.348 -5.941792e-02 2.804403e-02 -2.985352e+02 1.000000e-05 3.471058e-02 1 Chr01_963363 963363 0 C A 0.348 -5.355952e-02 2.812652e-02 -2.989624e+02 1.000000e-05 5.757579e-02 1 Chr01_973130 973130 0 T G 0.372 4.767074e-03 2.622390e-02 -3.007510e+02 1.000000e-05 8.558420e-01 1 Chr01_984316 984316 0 T G 0.372 4.767074e-03 2.622390e-02 -3.007510e+02 1.000000e-05 8.558420e-01 1 Chr01_1005384 1005384 2 G A 0.295 5.240743e-02 2.971348e-02 -2.992180e+02 1.000000e-05 7.851360e-02 1 Chr01_1016681 1016681 0 A G 0.353 -4.220423e-02 2.835923e-02 -2.996631e+02 1.000000e-05 1.374629e-01 1 Chr01_1038032 1038032 0 A C 0.279 4.236591e-02 3.032711e-02 -2.997941e+02 1.000000e-05 1.631762e-01 1 Chr01_1041421 1041421 0 G C 0.382 -1.001411e-03 2.606275e-02 -3.007668e+02 1.000000e-05 9.693690e-01 1 Chr01_1054506 1054506 10 A C 0.474 1.730822e-02 2.849996e-02 -3.005832e+02 1.000000e-05 5.439820e-01 1 Chr01_1082841 1082841 0 C T 0.424 1.087481e-02 2.654634e-02 -3.006837e+02 1.000000e-05 6.822729e-01 1 Chr01_1098983 1098983 1 A T 0.388 3.442727e-03 2.606239e-02 -3.007588e+02 1.000000e-05 8.949731e-01 1 Chr01_1108130 1108130 0 T C 0.186 -2.471725e-02 3.534233e-02 -3.005231e+02 1.000000e-05 4.847175e-01 1 Chr01_1121876 1121876 2 G C 0.293 3.222300e-02 2.980107e-02 -3.001838e+02 1.000000e-05 2.802095e-01 1 Chr01_1139754 1139754 1 A T 0.246 2.047344e-02 2.887832e-02 -3.005164e+02 1.000000e-05 4.787531e-01 1 Chr01_1152430 1152430 0 C T 0.162 -4.858721e-02 3.672522e-02 -2.998943e+02 1.000000e-05 1.865715e-01 1 Chr01_1163493 1163493 0 A C 0.329 6.249858e-03 2.821658e-02 -3.007430e+02 1.000000e-05 8.248160e-01 1 Chr01_1178618 1178618 0 G T 0.236 -1.604610e-02 3.204846e-02 -3.006422e+02 1.000000e-05 6.168620e-01 1 Chr01_1190494 1190494 0 G T 0.172 -5.181743e-02 3.526310e-02 -2.996907e+02 1.000000e-05 1.424734e-01 1 Chr01_1197507 1197507 0 G T 0.227 -1.728616e-02 3.281788e-02 -3.006289e+02 1.000000e-05 5.986646e-01 1 Chr01_1212139 1212139 0 G T 0.227 -1.728616e-02 3.281788e-02 -3.006289e+02 1.000000e-05 5.986646e-01 1 Chr01_1222306 1222306 0 G A 0.227 -1.728616e-02 3.281788e-02 -3.006289e+02 1.000000e-05 5.986646e-01 1 Chr01_1242727 1242727 0 A T 0.277 -1.613413e-02 3.051278e-02 -3.006278e+02 1.000000e-05 5.972524e-01 1 Chr01_1250568 1250568 0 A G 0.284 -1.896649e-02 3.012371e-02 -3.005694e+02 1.000000e-05 5.292921e-01 1 Chr01_1281386 1281386 0 G A 0.282 -2.409408e-02 3.016522e-02 -3.004488e+02 1.000000e-05 4.249031e-01 1 Chr01_1300879 1300879 5 A G 0.186 2.046401e-02 3.279253e-02 -3.005729e+02 1.000000e-05 5.329435e-01 1 Chr01_1321564 1321564 0 G C 0.081 -2.785676e-02 4.649541e-02 -3.005882e+02 1.000000e-05 5.494161e-01 1 Chr01_1335768 1335768 0 T A 0.081 -2.785676e-02 4.649541e-02 -3.005882e+02 1.000000e-05 5.494161e-01 1 Chr01_1355370 1355370 13 C T 0.216 -7.473623e-05 3.443625e-02 -3.007676e+02 1.000000e-05 9.982694e-01 1 Chr01_1369422 1369422 0 T C 0.430 -2.654065e-03 3.104354e-02 -3.007639e+02 1.000000e-05 9.319095e-01 1 Chr01_1376680 1376680 0 C A 0.430 -2.654065e-03 3.104354e-02 -3.007639e+02 1.000000e-05 9.319095e-01 1 Chr01_1404354 1404354 0 A T 0.428 1.612081e-02 2.813725e-02 -3.006035e+02 1.000000e-05 5.670014e-01 1 Chr01_1412580 1412580 0 A T 0.480 -1.307595e-02 2.990899e-02 -3.006720e+02 1.000000e-05 6.622017e-01 1 Chr01_1413196 1413196 0 C T 0.394 -1.846208e-02 3.060483e-02 -3.005857e+02 1.000000e-05 5.466805e-01 1 Chr01_1419753 1419753 3 C T 0.394 -1.887627e-02 3.054931e-02 -3.005767e+02 1.000000e-05 5.369858e-01 1 Chr01_1430318 1430318 0 C T 0.280 2.170847e-03 3.058428e-02 -3.007650e+02 1.000000e-05 9.434488e-01 1 Chr01_1438935 1438935 1 G T 0.420 2.030513e-02 2.785739e-02 -3.005021e+02 1.000000e-05 4.664796e-01 1 Chr01_1444578 1444578 0 T A 0.366 6.189401e-03 2.818926e-02 -3.007434e+02 1.000000e-05 8.263180e-01 1 Chr01_1444832 1444832 1 C G 0.086 2.448972e-02 4.650240e-02 -3.006289e+02 1.000000e-05 5.987316e-01 1 Chr01_1456262 1456262 0 C A 0.138 -1.264126e-02 3.832996e-02 -3.007132e+02 1.000000e-05 7.417179e-01 1 Chr01_1462583 1462583 0 G A 0.138 -1.264126e-02 3.832996e-02 -3.007132e+02 1.000000e-05 7.417179e-01 1 Chr01_1474165 1474165 0 G T 0.141 -3.054928e-02 3.821444e-02 -3.004483e+02 1.000000e-05 4.245093e-01 1 Chr01_1500487 1500487 0 G T 0.136 -2.197504e-02 3.898874e-02 -3.006088e+02 1.000000e-05 5.733158e-01 1 Chr01_1522258 1522258 2 T G 0.446 -6.679372e-03 2.711948e-02 -3.007372e+02 1.000000e-05 8.055772e-01 1 Chr01_1552486 1552486 0 C T 0.446 1.252622e-02 2.850318e-02 -3.006710e+02 1.000000e-05 6.605533e-01 1 Chr01_1576608 1576608 0 T A 0.311 7.110677e-03 2.804304e-02 -3.007354e+02 1.000000e-05 7.999597e-01 1 Chr01_1589731 1589731 0 A G 0.119 9.467159e-05 3.946900e-02 -3.007675e+02 1.000000e-05 9.980873e-01 1 Chr01_1604971 1604971 6 G A 0.318 3.582695e-02 3.078882e-02 -3.000916e+02 1.000000e-05 2.452454e-01 1 Chr01_1626497 1626497 0 A T 0.313 -2.423342e-02 2.823384e-02 -3.003995e+02 1.000000e-05 3.912196e-01 1 Chr01_1652466 1652466 6 T C 0.169 -5.713210e-02 3.398593e-02 -2.993594e+02 1.000000e-05 9.351077e-02 1 Chr01_1687863 1687863 0 T C 0.282 -5.003730e-02 2.893885e-02 -2.992781e+02 1.000000e-05 8.454565e-02 1 Chr01_1745560 1745560 0 G C 0.103 -1.273225e-02 4.316279e-02 -3.007240e+02 1.000000e-05 7.681561e-01 1 Chr01_1757335 1757335 0 G C 0.086 4.586423e-02 4.657887e-02 -3.002833e+02 1.000000e-05 3.253702e-01 1 Chr01_1779442 1779442 0 T C 0.215 -3.064500e-02 3.072283e-02 -3.002707e+02 1.000000e-05 3.191235e-01 1 Chr01_1800303 1800303 0 G A 0.177 -6.778950e-03 3.240695e-02 -3.007457e+02 1.000000e-05 8.344096e-01 1 Chr01_1837574 1837574 0 A G 0.095 -6.028380e-03 4.429643e-02 -3.007583e+02 1.000000e-05 8.918152e-01 1 Chr01_1848742 1848742 0 T C 0.198 -1.732335e-02 3.148223e-02 -3.006162e+02 1.000000e-05 5.824406e-01 1 Chr01_1870491 1870491 0 T G 0.203 6.165723e-03 3.617817e-02 -3.007530e+02 1.000000e-05 8.647583e-01 1 Chr01_1884073 1884073 6 T C 0.321 2.222033e-02 2.980161e-02 -3.004898e+02 1.000000e-05 4.563290e-01 1 Chr01_1902322 1902322 0 A C 0.203 6.165723e-03 3.617817e-02 -3.007530e+02 1.000000e-05 8.647583e-01 1 Chr01_1926434 1926434 0 T C 0.468 3.138823e-02 2.768302e-02 -3.001258e+02 1.000000e-05 2.575193e-01 1 Chr01_1938825 1938825 0 T C 0.263 -3.290983e-02 2.884851e-02 -3.001179e+02 1.000000e-05 2.546237e-01 1 Chr01_1952830 1952830 0 T G 0.322 2.566680e-02 2.996496e-02 -3.004010e+02 1.000000e-05 3.921857e-01 1 Chr01_1969992 1969992 0 G A 0.418 -6.805175e-03 2.738886e-02 -3.007367e+02 1.000000e-05 8.038984e-01 1 Chr01_1989227 1989227 0 A T 0.227 3.344340e-02 3.898733e-02 -3.004000e+02 1.000000e-05 3.915006e-01 1 Chr01_2004455 2004455 0 T G 0.227 9.610472e-03 3.718899e-02 -3.007342e+02 1.000000e-05 7.962099e-01 1 Chr01_2029307 2029307 0 T C 0.353 -2.490586e-02 2.937628e-02 -3.004085e+02 1.000000e-05 3.970293e-01 1 Chr01_2038154 2038154 0 C G 0.403 -2.851650e-02 3.100627e-02 -3.003451e+02 1.000000e-05 3.582672e-01 1 Chr01_2039211 2039211 1 C T 0.400 -2.949520e-02 3.082044e-02 -3.003101e+02 1.000000e-05 3.391279e-01 1 Chr01_2048408 2048408 0 A G 0.358 4.141307e-02 2.758137e-02 -2.996434e+02 1.000000e-05 1.339956e-01 1 Chr01_2057724 2057724 0 A G 0.162 -3.816319e-02 3.531045e-02 -3.001843e+02 1.000000e-05 2.804226e-01 1 Chr01_2060722 2060722 0 C A 0.161 -3.622997e-02 3.545941e-02 -3.002462e+02 1.000000e-05 3.075080e-01 1 Chr01_2062893 2062893 0 A T 0.358 -2.497401e-02 2.941726e-02 -3.004075e+02 1.000000e-05 3.963977e-01 1 Chr01_2076209 2076209 0 T G 0.465 -1.228025e-02 2.606128e-02 -3.006566e+02 1.000000e-05 6.377424e-01 1 Chr01_2095134 2095134 0 C T 0.451 -3.517255e-03 2.859339e-02 -3.007600e+02 1.000000e-05 9.021596e-01 1 Chr01_2105893 2105893 0 T C 0.475 5.327536e-03 2.838922e-02 -3.007499e+02 1.000000e-05 8.512352e-01 1 Chr01_2120506 2120506 0 T C 0.126 -2.500320e-02 3.969334e-02 -3.005693e+02 1.000000e-05 5.291031e-01 1 Chr01_2131952 2131952 0 G A 0.334 -5.578811e-02 2.793627e-02 -2.987832e+02 1.000000e-05 4.648496e-02 1 Chr01_2148364 2148364 0 T C 0.129 -1.881747e-02 3.952795e-02 -3.006543e+02 1.000000e-05 6.342877e-01 1 Chr01_2176548 2176548 1 T C 0.476 -7.534303e-03 2.908094e-02 -3.007340e+02 1.000000e-05 7.957025e-01 1 Chr01_2192226 2192226 0 C G 0.155 -3.537771e-02 3.613733e-02 -3.002889e+02 1.000000e-05 3.281645e-01 1 Chr01_2200376 2200376 0 A G 0.482 -1.226079e-02 2.903549e-02 -3.006784e+02 1.000000e-05 6.730489e-01 1 Chr01_2224366 2224366 0 G T 0.126 -1.100137e-02 3.933930e-02 -3.007285e+02 1.000000e-05 7.798838e-01 1 Chr01_2254103 2254103 0 A G 0.321 1.828514e-02 3.005474e-02 -3.005826e+02 1.000000e-05 5.432610e-01 1 Chr01_2262366 2262366 1 C T 0.445 2.994830e-03 2.954631e-02 -3.007624e+02 1.000000e-05 9.193136e-01 1 Chr01_2323614 2323614 0 A G 0.365 -3.286961e-03 3.034464e-02 -3.007617e+02 1.000000e-05 9.137938e-01 1 Chr01_2344551 2344551 0 A C 0.446 3.819764e-02 2.712494e-02 -2.997784e+02 1.000000e-05 1.598227e-01 1 Chr01_2354191 2354191 0 T C 0.277 2.428615e-02 3.128087e-02 -3.004664e+02 1.000000e-05 4.379643e-01 1 Chr01_2386556 2386556 0 T C 0.177 -1.910499e-03 3.675365e-02 -3.007662e+02 1.000000e-05 9.585689e-01 1 Chr01_2398914 2398914 1 G A 0.386 1.917852e-02 3.155852e-02 -3.005830e+02 1.000000e-05 5.437127e-01 1 Chr01_2406869 2406869 3 T C 0.367 -3.999200e-03 2.682617e-02 -3.007564e+02 1.000000e-05 8.815648e-01 1 Chr01_2420866 2420866 0 G A 0.122 6.429592e-03 3.873655e-02 -3.007538e+02 1.000000e-05 8.682521e-01 1 Chr01_2430762 2430762 0 A G 0.117 6.063135e-02 3.960862e-02 -2.995993e+02 1.000000e-05 1.265958e-01 1 Chr01_2438718 2438718 0 T C 0.496 -8.280088e-03 3.266183e-02 -3.007354e+02 1.000000e-05 8.000009e-01 1 Chr01_2476328 2476328 0 T A 0.362 3.262083e-02 3.084374e-02 -3.002090e+02 1.000000e-05 2.908503e-01 1 Chr01_2499825 2499825 0 C T 0.428 -1.350186e-03 3.050416e-02 -3.007666e+02 1.000000e-05 9.647167e-01 1 Chr01_2531696 2531696 0 C T 0.185 -1.050605e-02 3.402993e-02 -3.007199e+02 1.000000e-05 7.576832e-01 1 Chr01_2551113 2551113 14 T G 0.291 -1.036679e-02 3.122933e-02 -3.007125e+02 1.000000e-05 7.400906e-01 1 Chr01_2555603 2555603 0 G A 0.309 -2.103142e-02 3.042135e-02 -3.005287e+02 1.000000e-05 4.897428e-01 1 Chr01_2592973 2592973 1 A G 0.179 2.684139e-03 3.500737e-02 -3.007646e+02 1.000000e-05 9.389205e-01 1 Chr01_2616155 2616155 0 G C 0.169 1.267350e-02 3.551639e-02 -3.007039e+02 1.000000e-05 7.213979e-01 1 Chr01_2630731 2630731 0 C G 0.177 1.705520e-02 3.508049e-02 -3.006494e+02 1.000000e-05 6.271027e-01 1 Chr01_2642325 2642325 2 T A 0.257 4.648754e-02 3.493362e-02 -2.998840e+02 1.000000e-05 1.840109e-01 1 Chr01_2664143 2664143 0 C A 0.258 5.390922e-02 3.473159e-02 -2.995664e+02 1.000000e-05 1.213901e-01 1 Chr01_2669402 2669402 0 A G 0.411 4.907822e-02 3.896620e-02 -2.999759e+02 1.000000e-05 2.085602e-01 1 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7.203418e-03 2.860095e-02 -3.007358e+02 1.000000e-05 8.012753e-01 20 Chr20_28542104 28542104 0 C T 0.418 7.203418e-03 2.860095e-02 -3.007358e+02 1.000000e-05 8.012753e-01 20 Chr20_28551072 28551072 0 G A 0.310 2.240924e-02 3.101050e-02 -3.005066e+02 1.000000e-05 4.703146e-01 20 Chr20_28593546 28593546 1 G A 0.108 -2.515338e-02 4.101818e-02 -3.005796e+02 1.000000e-05 5.400658e-01 20 Chr20_28602971 28602971 0 C T 0.107 -2.435612e-02 4.101119e-02 -3.005913e+02 1.000000e-05 5.529120e-01 20 Chr20_28623107 28623107 0 C T 0.416 5.528499e-03 2.862753e-02 -3.007489e+02 1.000000e-05 8.469615e-01 20 Chr20_28647069 28647069 0 G A 0.418 7.203418e-03 2.860095e-02 -3.007358e+02 1.000000e-05 8.012753e-01 20 Chr20_28682964 28682964 1 G A 0.100 -2.172640e-02 4.253787e-02 -3.006372e+02 1.000000e-05 6.097966e-01 20 Chr20_28727874 28727874 0 G A 0.415 3.507212e-03 2.872277e-02 -3.007601e+02 1.000000e-05 9.028749e-01 20 Chr20_28742182 28742182 0 T C 0.332 1.624933e-02 3.064081e-02 -3.006270e+02 1.000000e-05 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