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Species
Manihot esculenta (cassava)
Hevea brasiliensis (rubber tree)
Mangifera indica (mango)
Ananas comosus (pineapple)
Saccharum officinarum (sugarcane)
Areca catechu (areca)
Musa acuminate (banana)
Theobroma cacao (cocoa)
Cocos nucifera (coconut)
Coffea canephora (coffee)
Litchi chinensis (litchi)
Dimocarpus longan (longan)
Elaeis guineensis (oilpalm)
Vanilla planifolia (vanilla)
Piper nigrum (pepper)
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TCOD
Genes
108661853
Detail information of 108661853
Basic Information
Position
Chr5:32686595-32688602
Length
2008bp
Strand
Reverse(-)
Synonym
LOC108661853
Nr
XP_017976032.1
Uniprot
A0A6P5WUW8
Pfam
PF00249
Interpro
IPR001005
GO
GO:0000003
GO:0000976
GO:0000977
GO:0000978
GO:0000981
GO:0000987
GO:0000988
GO:0000989
GO:0001012
GO:0001067
GO:0001076
GO:0001101
GO:0001134
GO:0001135
GO:0001935
GO:0003006
GO:0003674
GO:0003676
GO:0003677
GO:0003690
GO:0003700
GO:0005488
GO:0005515
GO:0005575
GO:0005622
GO:0005623
GO:0005634
GO:0005737
GO:0005829
GO:0006355
GO:0006357
GO:0006950
GO:0006952
GO:0006970
GO:0007275
GO:0008150
GO:0008283
GO:0009414
GO:0009415
GO:0009605
GO:0009607
GO:0009617
GO:0009620
GO:0009628
GO:0009651
GO:0009653
GO:0009719
GO:0009723
GO:0009725
GO:0009733
GO:0009737
GO:0009739
GO:0009741
GO:0009751
GO:0009753
GO:0009791
GO:0009888
GO:0009889
GO:0009891
GO:0009893
GO:0009908
GO:0009966
GO:0009967
GO:0009987
GO:0010033
GO:0010035
GO:0010038
GO:0010200
GO:0010243
GO:0010468
GO:0010556
GO:0010557
GO:0010604
GO:0010628
GO:0010646
GO:0010647
GO:0010928
GO:0010929
GO:0014070
GO:0019219
GO:0019222
GO:0022414
GO:0023051
GO:0023056
GO:0030154
GO:0031323
GO:0031325
GO:0031326
GO:0031328
GO:0032501
GO:0032502
GO:0032870
GO:0033993
GO:0035670
GO:0040008
GO:0042221
GO:0042493
GO:0042742
GO:0042802
GO:0042803
GO:0043207
GO:0043226
GO:0043227
GO:0043229
GO:0043231
GO:0043565
GO:0044212
GO:0044424
GO:0044444
GO:0044464
GO:0045893
GO:0045935
GO:0046677
GO:0046686
GO:0046983
GO:0048367
GO:0048437
GO:0048438
GO:0048440
GO:0048467
GO:0048481
GO:0048518
GO:0048519
GO:0048522
GO:0048523
GO:0048532
GO:0048579
GO:0048580
GO:0048581
GO:0048583
GO:0048584
GO:0048585
GO:0048586
GO:0048608
GO:0048638
GO:0048731
GO:0048827
GO:0048856
GO:0048869
GO:0050673
GO:0050789
GO:0050793
GO:0050794
GO:0050832
GO:0050896
GO:0051093
GO:0051171
GO:0051173
GO:0051239
GO:0051241
GO:0051252
GO:0051254
GO:0051302
GO:0051704
GO:0051707
GO:0051716
GO:0051782
GO:0060255
GO:0061458
GO:0065007
GO:0070887
GO:0071310
GO:0071367
GO:0071396
GO:0071407
GO:0071495
GO:0080050
GO:0080060
GO:0080090
GO:0080113
GO:0090567
GO:0097159
GO:0097305
GO:0098542
GO:0099402
GO:0140110
GO:1901363
GO:1901698
GO:1901700
GO:1901701
GO:1902680
GO:1903506
GO:1903508
GO:1904961
GO:1990837
GO:2000022
GO:2000026
GO:2000028
GO:2000031
GO:2000112
GO:2000241
GO:2000242
GO:2001023
GO:2001038
GO:2001141
KEGG
K09422
Function from GFF
transcription factor MYB29-like
Function from eggNOG-mapper
transcription factor
Genome & Sequence
Genome
GeneSeq
mRNASeq
cdsSeq
proteinSeq
cacao_B97-61/B2
108661853
mrna_XM_018120543.1_19638
cds_XP_017976032.1_17300
XP_017976032.1
Homolog Information
Orthologous gene graph
Homologous gene list
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Query Gene
Assembly for query gene
Orthologous gene
Paralogous gene
Assembly for homologous gene
Species for homologous gene
108661853
cacao_B97-61/B2
-
Pn10.1088
Pn15.2435
Pn15.714
Pn18.473
Pn26.438
Pn28.340
Pn38.51
pepper_reyin
pepper
108661853
cacao_B97-61/B2
Manes.08G151800
Manes.09G136100
Manes.01G034800
Manes.01G092500
Manes.02G047300
Manes.02G173200
Manes.05G103300
Manes.11G127600
Manes.12G155900
Manes.18G085635
cassava_AM560_JGI_v8
cassava
108661853
cacao_B97-61/B2
VANPL_A_00001g005870
VANPL_A_00003g000850
VANPL_A_00007g009770
VANPL_A_00001g018290
VANPL_A_00001g019100
VANPL_A_00002g007970
VANPL_A_00008g001200
VANPL_A_00010g000180
vanilla_CR00040_haplotypeA
vanilla
108661853
cacao_B97-61/B2
Manin02g006960
Manin03g004340
Manin00g009970
Manin01g001100
Manin09g003470
Manin14g002730
Manin15g007910
Manin16g002930
Manin17g007770
Manin20g001800
mango_Tommy-Atkins
mango
108661853
cacao_B97-61/B2
Vpl01Ag00784
Vpl03Ag06677
Vpl07Ag15603
Vpl11Ag21145
Vpl_s077Ag26808
Vpl01Ag02283
Vpl01Ag02361
Vpl02Ag05671
Vpl08Ag16258
Vpl10Ag19337
Vpl_s231Ag27586
vanilla_Daphna_haplotypeA
vanilla
108661853
cacao_B97-61/B2
GWHGBDNI028908
GWHGBDNI008901
GWHGBDNI014133
GWHGBDNI014153
GWHGBDNI016773
GWHGBDNI034634
longan_JDB
longan
108661853
cacao_B97-61/B2
Aco012607
Aco017900
Aco003309
Aco013389
Aco014685
Aco025559
pineapple_F153_v2
pineapple
108661853
cacao_B97-61/B2
Dil.05g016600.1
Dil.09g016170.1
Dil.10g014520.1
Dil.14g017800.1
Dil.15g018520.1
longan_shixia
longan
108661853
cacao_B97-61/B2
123206165
123220456
123196032
123198334
123203648
123204869
123206918
123215119
123217482
123226165
123229154
mango_Alphonso
mango
108661853
cacao_B97-61/B2
GH714_004650
GH714_022102
GH714_000663
GH714_004179
GH714_005160
GH714_005226
GH714_011700
GH714_011710
GH714_012383
GH714_012419
GH714_021870
GH714_021875
GH714_028422
GH714_031005
GH714_031948
rubber_tree_GT1
rubber tree
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Variant Information
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VarID
GeneID
Consequence Type |Effect
Allele Change
Residue Change
TranscriptID
ProteinID
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Expression Information
Expression level
Differential Expression
Select condition...
ProjectID
BioprojectID
#Samples
Organism
Description
Category
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logFC
P-value
Adj-value
AveExpr
ProjectID
BioprojectID
Category
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Visualization
Assembly
cacao_B97-61/B2
Assembly
Select assembly to view
Open
Show all regions in assembly