Detail information of cacao_B97-61/B2

Organism name:   Theobroma cacao

Cultivar:   B97-61/B2

Bioproject:   PRJEB14326

Submitter:   CIRAD

Year:   2016

Assembly level:   Chromosome

Sequencing technology   Illumina;PacBio

Genome coverage   52x

Total sequence length:   324,879,930 bp

chromosomes and scaffolds:   11 chromosomes and 420 scaffolds

Scaffold N50:   36,364,294 bp

median GC content(%):   32.15

Argout X, Martin G, Droc G, et al. The cacao Criollo genome v2.0: an improved version of the genome for genetic and functional genomic studies. BMC Genomics. 2017;18(1):730. Published 2017 Sep 15. doi:10.1186/s12864-017-4120-9 [OpenLBID: OLB-PM-28915793]

Chrom Size(Mb) GC% Gene
Chr1 37.32 32.96 3,510
Chr2 41.24 32.48 3,144
Chr3 36.36 32.23 2,730
Chr4 31.93 32.61 2,594
Chr5 39.37 32.01 2,764
Chr6 26.30 31.61 2,024
Chr7 21.61 32.36 1,545
Chr8 19.59 32.25 1,685
Chr9 38.63 31.90 3,084
Chr10 21.82 32.14 1,481
chloroplast 0.16 36.87 126
Unplace 10.53 28.39 270

tuli
chr1chr2chr3chr4chr5chr6chr7chr8chr9chr10