1. TCOD
  2. Assembly
  3. lychee_FZX

Detail information of lychee_FZX

Organism name:   Litchi chinensis

Cultivar:   FZX

Bioproject:   PRJNA747875

Submitter:   South China Agricultural University

Year:   2021

Assembly level:   Chromosome

Sequencing technology   PacBio Sequel

Genome coverage   120x

Total sequence length:   470,368,600 bp

chromosomes and scaffolds:   15 chromosomes and 0 scaffolds

Scaffold N50:   30,902,938 bp

median GC content(%):   34.03

Hu G, Feng J, Xiang X, et al. Two divergent haplotypes from a highly heterozygous lychee genome suggest independent domestication events for early and late-maturing cultivars. Nat Genet. 2022;54(1):73-83. doi:10.1038/s41588-021-00971-3 [OpenLBID: OLB-PM-34980919]

Chrom Size(Mb) GC% Gene
Chr1 49.72 34.18 3,627
Chr2 39.91 34.01 2,158
Chr3 36.72 34.55 2,733
Chr4 34.61 33.44 1,951
Chr5 34.40 33.85 2,228
Chr6 32.07 33.52 2,067
Chr7 30.90 34.19 1,777
Chr8 30.27 34.20 2,240
Chr9 30.12 34.03 1,950
Chr10 28.14 34.75 1,952
Chr11 26.23 33.64 1,747
Chr12 24.68 33.86 1,990
Chr13 24.52 34.02 1,656
Chr14 24.39 33.78 1,986
Chr15 23.68 34.33 1,834

tuli
chr1chr2chr3chr4chr5chr6chr7chr8chr9chr10chr11chr12chr13chr14chr15