1. TCOD
  2. Assembly
  3. lychee_FZX

Detail information of lychee_FZX

Organism name:   Litchi chinensis

Cultivar:   FZX

Bioproject:   PRJNA747875

Submitter:   South China Agricultural University

Year:   2021

Assembly level:   Chromosome

Sequencing technology   PacBio Sequel

Genome coverage   120x

Total sequence length:   470,368,600 bp

chromosomes and scaffolds:   15 chromosomes and 0 scaffolds

Scaffold N50:   30,902,938 bp

median GC content(%):   34.03

Hu G, Feng J, Xiang X, et al. Two divergent haplotypes from a highly heterozygous lychee genome suggest independent domestication events for early and late-maturing cultivars. Nat Genet. 2022;54(1):73-83. doi:10.1038/s41588-021-00971-3 [OpenLBID: OLB-PM-34980919]

Chrom Size(Mb) GC% Gene
Chr1 49.720996 34.1801 3,627
Chr2 39.913022 34.0085 2,158
Chr3 36.721796999999995 34.5534 2,733
Chr4 34.608567 33.4449 1,951
Chr5 34.400222 33.849 2,228
Chr6 32.069176999999996 33.5208 2,067
Chr7 30.902938 34.1853 1,777
Chr8 30.266306 34.1992 2,240
Chr9 30.124626 34.0336 1,950
Chr10 28.1406 34.7528 1,952
Chr11 26.228562 33.6445 1,747
Chr12 24.682402999999997 33.8627 1,990
Chr13 24.517789 34.023 1,656
Chr14 24.387438 33.781 1,986
Chr15 23.684157 34.3274 1,834

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