Synteny Viewer

The Synteny Viewer can not only view the collinearity results between different species but also between different subspecies of the same species. Specific steps as follows:

    1. After selecting the options 'Species' and 'Genomes' from the drop-down menu, click the 'View' button. This will display both the 'DotplotView' and 'LinearSyntenyView' at the bottom of the page. In the 'LinearSyntenyView', the default display area is chromosome chr1, but the user has the option to modify it as needed.

    2. To focus on a specific area of interest in the 'DotplotView', the user can draw a rectangle area on the dot plot to either 'zoom in' or 'open linear synteny view'. Within the 'LinearSyntenyView', the user can also add gff annotations to further view the genes located in this region.


  Interspecies:
  Intraspecies:

Notes: Please select the dropdown boxes from left to right, ensuring that each dropdown box has a selected value.