CAT Composition Analysis Toolkit
Introduction
CAT (Composition Analysis Toolkit) is a software package that includes a novel measure of codon usage bias, Codon Deviation Coefficient (CDC). Unlike previous measures, CDC effectively accounts for background nucleotide composition in estimating codon usage bias and utilizes a bootstrap assessment of the statistical significance of codon usage bias.
Publications
Codon Deviation Coefficient: A Novel Measure For Estimating Codon Usage Bias And Its Statistical Significance.
Cite thisCited by 58 (Google Schoolar as of August 2, 2021)
Credits
- Zhang Zhang zhangzhang@big.ac.cn Investigator
BIG Data Center, Beijing Institute of Genomics (BIG), Chinese Academy of Sciences, China
Community Ratings
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Summary
Accession | BT000002 |
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Tool Type | Application |
Category | Natural selection |
Platforms | Linux/Unix, MAC OS X, Windows |
Technologies | C++ |
User Interface | Desktop GUI, Terminal Command Line |
Input Data | FASTA |
Download Count | 0 |
Country/Region | China |
Submitted By | Zhang Zhang |