STRsensor Short Tandem Repeats (STR) Detection
Introduction
STRsensor (v1.2.0) is a method that can achieve high performance in both whole genome sequencing (WGS) data and multiplex deep sequencing data in STR allele-typing. The benchmark shows that STRsensor can obtain 99.64% detection ratio and 99.9% accuracy in 687 multiplex deep sequencing samples, while 100% detection ratio and 99.37% accuracy in a simulated 30 low-coverage WGS data.
Publications
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Credits
- xiaolong zhang zhangxiaolong@big.ac.cn Developer
Precision medicine laboratory, Beijing Institute of Genomics, Chinese Academy of Sciences, China
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Summary
Accession | BT007090 |
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Tool Type | Application |
Category | Other tools |
Platforms | Linux/Unix |
Technologies | C |
User Interface | Terminal Command Line |
Input Data | BAM |
Latest Release | v1.2.0 (December 5, 2020) |
Download Count | 4062 |
Submitted By | xiaolong zhang |