circAtlas An integrated resource of circRNAs in vertebrates.

Introduction

Circular RNAs (circRNAs) are a novel class of RNAs with important biological implications. Currently, a huge number of circRNAs was already identified from high-throughput RNA-seq data sets. However, functional annotation and prioritization of these circRNAs for further expreimental validation as well as functional investigation is the bottleneck step for current circRNA studies. Now, we developed a new resource database and web tool named circAtlas 2.0 that integrated over one millions of circRNAs across 6 species (human, macaca, mouse, rat, pig, chicken) and a variety of tissues. The circAtlas 2.0 can fill this gap by integrating the most comprehensive circRNAs and their expression and functional profiles in vertebrates, which provides a foundation for circRNA studies and serves as a powerful starting point to investigate their biological significance.

Publications

  1. CircAtlas: an integrated resource of one million highly accurate circular RNAs from 1070 vertebrate transcriptomes
    Cite this
    Wanying Wu, Peifeng Ji, Fangqing Zhao, 2020/4/28 - Genome Biology
    Cited by 29 (Google Schoolar as of May 31, 2021)

Credits

  1. Wanying Wu wuwanying@biols.ac.cn
    Developer

    Computational Genomics Lab, Beijing Institutes of Life Sciences, China

  2. Fangqing Zhao zhfq@biols.ac.cn
    Investigator

    Computational Genomics Lab, Beijing Institutes of Life Sciences, China

Community Ratings

UsabilityEfficiencyReliabilityRated By
0 user
Sign in to rate
Summary
AccessionBT007166
Tool TypeApplication
CategoryFunctional annotation, CircRNA data
PlatformsLinux/Unix, MAC OS X, Windows
TechnologiesJava
User InterfaceWebpage
Latest Releasev2.0 (May 31, 2021)
Download Count1
Country/RegionChina
Submitted ByJinyang Zhang
Fundings

2018YFC0910400