circAtlas An integrated resource of circRNAs in vertebrates.
Introduction
Circular RNAs (circRNAs) are a novel class of RNAs with important biological implications. Currently, a huge number of circRNAs was already identified from high-throughput RNA-seq data sets. However, functional annotation and prioritization of these circRNAs for further expreimental validation as well as functional investigation is the bottleneck step for current circRNA studies. Now, we developed a new resource database and web tool named circAtlas 2.0 that integrated over one millions of circRNAs across 6 species (human, macaca, mouse, rat, pig, chicken) and a variety of tissues. The circAtlas 2.0 can fill this gap by integrating the most comprehensive circRNAs and their expression and functional profiles in vertebrates, which provides a foundation for circRNA studies and serves as a powerful starting point to investigate their biological significance.
Publications
CircAtlas: an integrated resource of one million highly accurate circular RNAs from 1070 vertebrate transcriptomes
Cite thisCited by 29 (Google Schoolar as of May 31, 2021)
Credits
- Wanying Wu wuwanying@biols.ac.cn Developer
Computational Genomics Lab, Beijing Institutes of Life Sciences, China
- Fangqing Zhao zhfq@biols.ac.cn Investigator
Computational Genomics Lab, Beijing Institutes of Life Sciences, China
Community Ratings
Usability | Efficiency | Reliability | Rated By |
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Accession | BT007166 |
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Tool Type | Application |
Category | Functional annotation, CircRNA data |
Platforms | Linux/Unix, MAC OS X, Windows |
Technologies | Java |
User Interface | Webpage |
Latest Release | v2.0 (May 31, 2021) |
Download Count | 1 |
Country/Region | China |
Submitted By | Jinyang Zhang |
2018YFC0910400