VisFeature A stand-alone program for visualizing and analyzing statistical features of biological sequences.

Introduction

Many efforts have been made in developing bioinformatics algorithms to predict functional attributes of genes and proteins from their primary sequences. One challenge in this process is to intuitively analyze and to understand the statistical features that have been selected by heuristic or iterative methods.We developed VisFeature, which aims to be a helpful software tool that allows the users to intuitively visualize and analyze statistical features of all types of biological sequence, including DNA, RNA and proteins. VisFeature also integrates sequence data retrieval, multiple sequence alignments and statistical feature generation functions.

Publications

  1. VisFeature: a stand-alone program for visualizing and analyzing statistical features of biological sequences
    Jun Wang, Pu-Feng Du, Xin-Yu Xue, Guang-Ping Li, Yuan-Ke Zhou, Wei Zhao, Hao Lin, Wei Chen, 2020.02.15 - Bioinformatics

Credits

  1. Pu-Feng Du pdu@tju.edu.cn
    Investigator

    College of Intelligence and Computing, Tianjin University, China

  2. Wei Chen chenweiimu@gmail.com
    Investigator

    Innovative Institute of Chinese Medicine and Pharmacy, Chengdu University of Traditional Chinese Medicine, China

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Summary
AccessionBT007262
Tool TypeApplication
CategoryData visualization
PlatformsLinux/Unix, MAC OS X, Windows
TechnologiesJava
User InterfaceDesktop GUI
Input DataFASTA
Latest Releasev1.0 (September 14, 2021)
Download Count362
Country/RegionChina
Submitted ByShaoliang Peng
Fundings

2018YFC0910400