McAN a fast minimum-cost arborescence based haplotype network construction algorithm
Introduction
McAN is a tool for haplotype network construction for sequences. The web service of McAN will be found here https://ngdc.cncb.ac.cn/ncov/online/tool/haplotype. The haplotype network of SARS-CoV-2 constructed by McAN will be found here https://ngdc.cncb.ac.cn/ncov/haplotype/.
Publications
Credits
- Lun Li lil@big.ac.cn InvestigatorDeveloper
NGDC, Beijing Institute of Genomics, Chinese Academy of Sciences / China National Center for Bioinformation, China
- Bo Xu xubo123@big.ac.cn InvestigatorDeveloper
NGDC, Beijing Institute of Genomics, Chinese Academy of Sciences / China National Center for Bioinformation, China
Community Ratings
Usability | Efficiency | Reliability | Rated By |
---|---|---|---|
2 users | |||
Sign in to rate | |||
lil***l@big.ac.cn (February 24, 2023) | |||
zha***s@big.ac.cn (May 22, 2023) |
Summary
Accession | BT007301 |
---|---|
Tool Type | Application |
Category | Haplotype network construction |
Platforms | Linux/Unix |
Technologies | C, C++ |
User Interface | Terminal Command Line, Webpage |
Input Data | VCF |
Latest Release | SupplementaryDatasetV0.0 (April 19, 2022) |
Download Count | 7440 |
Country/Region | China |
Submitted By | Lun Li |
Fundings
2021YFF0703703, 2021YFC0863300, ANSO-CR-KP-2022-09, XDB38030200, 32270718, 32170678, 2017141, Z211100002121006