AB-Gen A tool for antibody library design

Introduction

 This is the source code for AB-Gen, a tool for antibody library design. It can efficiently explore the antibody space and design CDRH3 sequences that fulfill multi-property constraints.

  • Publication: TBA
  • Files included in this release:
    • 1.pipeline.jpg: the workflow of AB-Gen.
    • charlesxu90/ab-gen-v1.0.zip: the source code of AB-Gen.
    • data.zip: the filtered datasets to train the prior model, the pretrained models, and the designed sequences. 
  • Source code repository: https://github.com/charlesxu90/ab-gen

Publications

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Credits

  1. Xiaopeng Xu xiaopeng.xu@kaust.edu.sa
    Contributor

    Computational Bioscience Research Center, King Abdullah University of Science and Technology (KAUST), Saudi Arabia

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xia***u@kaust.edu.sa (March 15, 2023)
Summary
AccessionBT007341
Tool TypeApplication
Category
PlatformsLinux/Unix
TechnologiesPython3
User InterfaceTerminal Command Line
Latest Releasev1.0 (March 15, 2023)
Download Count583
Submitted ByXiaopeng Xu
Fundings

This work was supported in part by the Office of Research Administration (ORA), King Abdullah University of Science and Technology (KAUST), under Grant FCC/1/1976-44-01.