DVsc an automated framework for Detecting Viral infection
Introduction
DVsc is an open-source framework for the precise quantitative analysis of viral infection from the single-cell transcriptomics data. The DVsc supports FASTQ format as input and is compatible with multiple single-cell sequencing platforms. Moreover, it could also be applied to the sequences from bulk RNA-sequencing (RNA-seq) data.
Publications
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Credits
- Fei Leng lengf10@163.com Investigator
Beijing pediatric institute, Beijing Children Hospital, China
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Summary
| Accession | BT007367 |
|---|---|
| Tool Type | Framework |
| Category | Virus detection |
| Platforms | Linux/Unix |
| Technologies | Python3 |
| User Interface | Terminal Command Line |
| Input Data | FASTQ |
| Latest Release | V1.0 (June 6, 2023) |
| Download Count | 186 |
| Country/Region | China |
| Submitted By | Fei Leng |
Fundings
This work was supported by grants from the National Natural Science Foundation of China [31830054; 91954000], and the Beijing Municipal Health Commission [JingYiYan2019-8; XTCX20180503].