| 项目编号 | PRJCA001158 | |||||||||||||||||||||||||
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| 项目标题 | sequence of tea plant | |||||||||||||||||||||||||
| 涉及领域 | Agricultural | |||||||||||||||||||||||||
| 数据类型 |
Whole genome sequencing
Transcriptome or Gene expression Genome sequencing and assembly Raw sequence reads Genome sequencing |
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| 物种名称 |
Camellia
Camellia sinensis var. assamica Camellia sasanqua Camellia sinensis var. pubilimba Camellia sinensis var. sinensis Camellia atrothea Camellia gymnogyna Camellia crassicolumna Camellia taliensis |
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| 描述信息 | Here we sequenced and assembled a high quality tea plant (longjing43) and resequenced 139 diverse tea collected from around the world. These included 93 in China ,1 in Burma, 6 in Georgia,5 in Hawaii,1 in India,12 in Japan,7 in Kenya,5 in Laos,5 in Nepal,1 in Sri Lanka and 3 in Vietnam. Genomic DNA was extracted and sequenced to a average depth of 13.6X per individual. The whole genome and population genomic analyses using these data provided insights into the origin and differentiation of the tea | |||||||||||||||||||||||||
| 样品范围 | Multiisolate | |||||||||||||||||||||||||
| 发布日期 | 2018-12-13 | |||||||||||||||||||||||||
| 出版信息 |
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| 实验材料提供者 | Tea Research Institute, Chinese Academy of Agricultural Sciences | |||||||||||||||||||||||||
| 项目资金来源 |
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| 提交者 | alun li (lialun@caas.cn) | |||||||||||||||||||||||||
| 提交单位 | Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences | |||||||||||||||||||||||||
| 提交日期 | 2018-12-07 |