项目编号

PRJCA001755

项目标题

Long-read sequence assembly of Ginkgo biloba

涉及领域

Model organism

数据类型

Whole genome sequencing
Raw sequence reads

物种名称

Ginkgo biloba

描述信息

Annotation files were free in----https://figshare.com/articles/dataset/annotation_of_Ginkgo_biloba/14759223

样品范围

Monoisolate

发布日期

2022-08-24

出版信息

PubMed ID	文章标题	杂志名称	Doi	发表年份
	The nearly complete genome of Ginkgo biloba illuminates gymnosperm evolution	Nature Plants	10.1038/s41477-021-00933-x
40413410	Transcriptional dynamics and functions of WUSCHEL-related homeobox (WOX) genes from Ginkgo biloba in tissue culture	BMC Plant Biology	10.1186/s12870-025-06719-z	2025
37872493	Genome-wide identification and expression analysis of the NRT genes in Ginkgo biloba under nitrate treatment reveal the potential roles during calluses browning	BMC Genomics	10.1186/s12864-023-09732-4	2023
35946987	Evolution of complex genome architecture in gymnosperms	GigaScience	10.1093/gigascience/giac078	2022
38593080	The cAMP signaling module regulates sperm motility in the liverwort Marchantia polymorpha	Proceedings of the National Academy of Sciences of the United States of America	10.1073/pnas.2322211121	2024

项目资金来源

机构	项目类型	授权项目ID	授权项目名称
Key Forestry Public Welfare Project		201504105

提交者

Hailin Liu (lhl@njfu.edu.cn)

提交单位

Nanjing Forestry University

提交日期

2019-09-17

项目包含数据信息

资源名称	描述
BioSample (21) show	-
SAMC851823	RNA-seq of Ginkgo Seed/July
SAMC851822	RNA-seq of Ginkgo Seed/June
SAMC851821	RNA-seq of Ginkgo Seed/May
SAMC851820	RNA-seq of Ginkgo Endosperm/August
SAMC851819	RNA-seq of Ginkgo Bark/July
SAMC851818	RNA-seq of Ginkgo Newly flush shoot/July
SAMC851817	RNA-seq of Ginkgo Spur shoots/Late May
SAMC851816	RNA-seq of Ginkgo Long branch/ Late May
SAMC851815	RNA-seq of Ginkgo Seedling root
SAMC851814	RNA-seq of Ginkgo Inflorescence/April
SAMC851813	RNA-seq of Ginkgo Inflorescence/April
SAMC851812	RNA-seq of Ginkgo Leaf/October
SAMC851811	RNA-seq of Ginkgo Leaf/September
SAMC851810	RNA-seq of Ginkgo Leaf/August
SAMC851809	RNA-seq of Ginkgo Leaf/July
SAMC851808	RNA-seq of Ginkgo Leaf/June
SAMC851807	RNA-seq of Ginkgo Leaf/May
SAMC851806	RNA-seq of Ginkgo Leaf/April
SAMC345818	ginkgo_njfu_Illumina
SAMC108289	ginkgo Hi-C data
SAMC108288	Whole genome sequencing of Ginkgo biloba by PacBio RSII
GSA (4)	-
CRA007927	Transcriptome sequencing of Ginkgo biloba
CRA004012	Whole genome sequence of Ginkgo biloba by Illumina
CRA002032	Raw sequence of Ginkgo biloba by PacBio RSII
CRA002041	Hi-C data of Ginkgo biloba