| 项目编号 | PRJCA003033 | |||||||||||||||||||||||||
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| 项目标题 | Raphanus pan-genome | |||||||||||||||||||||||||
| 涉及领域 | Agricultural | |||||||||||||||||||||||||
| 数据类型 |
Whole genome sequencing
Transcriptome or Gene expression Genome sequencing and assembly Raw sequence reads |
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| 物种名称 |
Raphanus sativus var. sativus
Raphanus sativus var. oleiformis Raphanus sativus var. caudatus Raphanus raphanistrum subsp. landra Raphanus raphanistrum subsp. raphanistrum Raphanus sativus var. niger Raphanus sativus var. raphanistroides Raphanus raphanistrum |
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| 描述信息 | To reveal the evolution, speciation, gene flow and pan-genome of Raphanus, we de novo assembled eleven genomes covering all of the typical sub-species and varieties of domesticated, wild and weed radishes, coming from east Asian, south Asian, Europe and America, using single-molecule sequencing, BioNano optical mapping and high-through chromosome conformation capture (HiC) technologies. | |||||||||||||||||||||||||
| 样品范围 | Multispecies | |||||||||||||||||||||||||
| 发布日期 | 2020-07-13 | |||||||||||||||||||||||||
| 出版信息 |
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| 项目资金来源 |
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| 提交者 | Xiaohui Zhang (zhangxiaohui01@caas.cn) | |||||||||||||||||||||||||
| 提交单位 | Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences | |||||||||||||||||||||||||
| 提交日期 | 2020-07-13 |