项目编号

PRJCA005463

项目标题

Biochemical and genetic basis analysis of coconut pulp metabolome and excavation and application of nutritional quality genes

涉及领域

Agricultural

数据类型

Genome sequencing and assembly

物种名称

Cocos nucifera

描述信息

In this project, we annotated high-quality reference genome sequences by assembling two coconut varieties. Using this data and other multi omics data, we provided insights on monocotyledon chromosome evolution and crop differentiation

样品范围

Multiisolate

发布日期

2021-12-16

出版信息

PubMed ID	文章标题	杂志名称	Doi	发表年份
34736486	High-quality reference genome sequences of two coconut cultivars provide insights into evolution of monocot chromosomes and differentiation of fiber content and plant height	Genome Biology	10.1186/s13059-021-02522-9	2021
40094616	Genetic Characterization of SWEET Genes in Coconut Palm. Plants 2025, 14, 686	Plants	10.3390/plants14050686	2025
38887458	High-density linkage to physical mapping in a unique Tall × Dwarf coconut ( Cocos nucifera L.) outbred F 2 uncovers a major QTL for flowering time colocalized with the FLOWERING LOCUS T (FT)	Frontiers in Plant Science	10.3389/fpls.2024.1408239	2024
39719939	Genome-wide identification and characterization of BASIC PENTACYSTEINE transcription factors and their binding motifs in coconut palm	Frontiers in Plant Science	10.3389/fpls.2024.1491139	2024
40872154	Evolutionary Insights and Flowering Regulation of SPLs in Coconut Palm	Plants	10.3390/plants14162532	2025

项目资金来源

机构	项目类型	授权项目ID	授权项目名称
National Natural Science Foundation of China (NSFC)		No.31960213
Hainan Major Science and Technology Project		No.zdkj201902

提交者

Shouchuang Wang (bioinfo@mail.hzau.edu.cn)

提交单位

Hainan University

提交日期

2021-06-15

项目包含数据信息

资源名称	描述
BioSample (144) show	-
SAMC535982	AZYZ503
SAMC535981	AZYZ502
SAMC535980	GZYZ497
SAMC535979	GZYZ481
SAMC535978	GZYZ476
SAMC535977	GZYZ464
SAMC535976	GZYZ451
SAMC535975	GZYZ440
SAMC535974	AZYZ422
SAMC535973	GZYZ417
SAMC535972	GZYZ406
SAMC535971	GZYZ402
SAMC535970	AZYZ370
SAMC535969	AZYZ369
SAMC535968	AZYZ364
SAMC535967	AZYZ357
SAMC535966	AZYZ342
SAMC535965	AZYZ340
SAMC535964	AZYZ335
SAMC535963	AZYZ331
SAMC535962	AZYZ324
SAMC535961	AZYZ317
SAMC535960	AZYZ316
SAMC535959	AZYZ312
SAMC535958	AZYZ311
SAMC535957	AZYZ310
SAMC535956	AZYZ306
SAMC535955	AZYZ302
SAMC535954	AZYZ297
SAMC535953	AZYZ283
SAMC535952	AZYZ278
SAMC535951	AZYZ277
SAMC535950	AZYZ272
SAMC535949	AZYZ271
SAMC535948	AZYZ266
SAMC535947	AZYZ265
SAMC535946	AZYZ259
SAMC535945	GZYZ254
SAMC535944	AZYZ247
SAMC535943	AZYZ246
SAMC535942	AZYZ245
SAMC535941	AZYZ242
SAMC535940	AZYZ238
SAMC535939	AZYZ232
SAMC535938	GZYZ229
SAMC535937	AZYZ226
SAMC535936	AZYZ217
SAMC535935	AZYZ216
SAMC535934	AZYZ214
SAMC535933	AZYZ210
SAMC535932	AZYZ209
SAMC535931	AZYZ206
SAMC535930	AZYZ203
SAMC535929	AZYZ191
SAMC535928	AZYZ185
SAMC535927	AZYZ178
SAMC535926	AZYZ170
SAMC535925	AZYZ169
SAMC535924	AZYZ158
SAMC535923	AZYZ150
SAMC535922	AZYZ143
SAMC535921	AZYZ142
SAMC535920	AZYZ141
SAMC535919	AZYZ131
SAMC535918	AZYZ130
SAMC535917	AZYZ128
SAMC535916	AZYZ124
SAMC535915	AZYZ122
SAMC535914	AZYZ118
SAMC535913	AZYZ113
SAMC535912	AZYZ090
SAMC535911	AZYZ085
SAMC535910	AZYZ084
SAMC535909	AZYZ072
SAMC535908	AZYZ068
SAMC535907	AZYZ045
SAMC535906	AZYZ034
SAMC535905	GZYZ023
SAMC535904	AZYZ010
SAMC535903	GZYZ009
SAMC535900	CnD_WGS
SAMC535398	CnT_WGS
SAMC535397	CnD_WGS
SAMC534847	YZ-18
SAMC534846	YZ-13
SAMC534845	YZ-11
SAMC534844	YZ5
SAMC534843	YZ3
SAMC534842	YZ14
SAMC534841	CnD
SAMC534840	CnT
SAMC462662	WGS of dwarf coconut
SAMC445253	RNA-seq of high coconut
SAMC445252	RNA-seq of high coconut
SAMC445251	RNA-seq of high coconut
SAMC445250	RNA-seq of high coconut
SAMC445249	RNA-seq of high coconut
SAMC445248	RNA-seq of high coconut
SAMC445247	RNA-seq of high coconut
SAMC445246	RNA-seq of high coconut
SAMC445245	RNA-seq of high coconut
SAMC445244	RNA-seq of high coconut
SAMC445243	RNA-seq of high coconut
SAMC445242	RNA-seq of high coconut
SAMC445241	RNA-seq of high coconut
SAMC445240	RNA-seq of high coconut
SAMC445239	RNA-seq of high coconut
SAMC445238	RNA-seq of high coconut
SAMC445237	RNA-seq of high coconut
SAMC445236	RNA-seq of high coconut
SAMC445235	RNA-seq of high coconut
SAMC445234	RNA-seq of high coconut
SAMC445233	RNA-seq of high coconut
SAMC445232	RNA-seq of high coconut
SAMC445231	RNA-seq of high coconut
SAMC445230	RNA-seq of high coconut
SAMC445229	RNA-seq of high coconut
SAMC445228	RNA-seq of high coconut
SAMC445227	RNA-seq of dwarf coconut
SAMC445226	RNA-seq of dwarf coconut
SAMC445225	RNA-seq of dwarf coconut
SAMC445224	RNA-seq of dwarf coconut
SAMC445223	RNA-seq of dwarf coconut
SAMC445222	RNA-seq of dwarf coconut
SAMC445221	RNA-seq of dwarf coconut
SAMC445220	RNA-seq of dwarf coconut
SAMC445219	RNA-seq of dwarf coconut
SAMC445218	RNA-seq of dwarf coconut
SAMC445217	RNA-seq of dwarf coconut
SAMC445216	RNA-seq of dwarf coconut
SAMC445215	RNA-seq of dwarf coconut
SAMC445214	RNA-seq of dwarf coconut
SAMC445213	RNA-seq of dwarf coconut
SAMC445212	RNA-seq of dwarf coconut
SAMC445211	RNA-seq of dwarf coconut
SAMC445210	RNA-seq of dwarf coconut
SAMC445209	RNA-seq of dwarf coconut
SAMC445208	RNA-seq of dwarf coconut
SAMC445207	RNA-seq of dwarf coconut
SAMC445206	RNA-seq of dwarf coconut
SAMC445205	RNA-seq of dwarf coconut
SAMC445204	RNA-seq of dwarf coconut
SAMC393073	assembled genome of tall coconut
SAMC393072	assembled genome of dwarf coconut
GSA (7) show	-
CRA005601	Coconut genome resequencing data
CRA005593	Cocos nucifera dwarf Nanopore data
CRA005568	Cocos nucifera tall Nanopore data
CRA005571	Cocos nucifera dwarf Hi-C data
CRA005570	Cocos nucifera tall Hi-C data
CRA005120	Biochemical and genetic basis analysis of coconut pulp metabolome and excavation and application of nutritional quality genes
CRA004778	High-quality reference genome sequences of two coconut cultivars provide insights into evolution of monocot chromosomes and crop differentiation