Accession

PRJCA006811

Title

Sex determination and dimorphism of Populus euphratica

Relevance

Evolution

Data types

Epigenomics
Transcriptome or Gene expression
Genome sequencing and assembly

Organisms

Populus euphratica

Description

To unveil the molecular basis of sex determination, the program de novo assembled the chromosomal female and male genome, identified the sex-liked region by bulk segregant analysis, displayed the transcriptomic and epigenetic dimorphism of sex about P. euphratica.

Sample scope

Multiisolate

Release date

2022-10-05

Biomaterial provider

Tarim university

Grants

Agency	program	Grant ID	Grant title
National Natural Science Foundation of China (NSFC)	General Program	31460042	The physiological regulation of heteromorphic leaf of Populus euphratica and its relationship with growth transformation.
Xinjiang Production and Construction Corps	Innovative Team Building Plan for Key Areas of Xinjiang Production and Construction Corps	2018CB003	Protection, excavation and utilization of Populus euphratica Germplasm Resources

Submitter

Shanhe Zhang (zhanghh1127@163.com)

Organization

Tarim university

Submission date

2021-10-08

Project Data

Resource name	Description
BioSample (36) show	-
SAMC477203	Bisulfite-seq of Populus euphratica: stem of male-28 in environment 2
SAMC477202	Bisulfite-seq of Populus euphratica: stem of male-23 in environment 2
SAMC477201	Bisulfite-seq of Populus euphratica: stem of male-19 in environment 2
SAMC477200	Bisulfite-seq of Populus euphratica: stem of male-11 in environment 1
SAMC477199	Bisulfite-seq of Populus euphratica: stem of male-9 in environment 1
SAMC477198	Bisulfite-seq of Populus euphratica: stem of male-6 in environment 1
SAMC477197	Bisulfite-seq of Populus euphratica: stem of female-31 in environment 2
SAMC477196	Bisulfite-seq of Populus euphratica: stem of female-30 in environment 2
SAMC477195	Bisulfite-seq of Populus euphratica: stem of female-29 in environment 2
SAMC477194	Bisulfite-seq of Populus euphratica: stem of female-8 in environment 1
SAMC477193	Bisulfite-seq of Populus euphratica: stem of female-4 in environment 1
SAMC477192	Bisulfite-seq of Populus euphratica: stem of female-1 in environment 1
SAMC476525	RNA-seq of Populus euphratica: leaf of male-5
SAMC476524	RNA-seq of Populus euphratica: leaf of male-4
SAMC476523	RNA-seq of Populus euphratica: leaf of male-3
SAMC476522	RNA-seq of Populus euphratica: leaf of male-2
SAMC476521	RNA-seq of Populus euphratica: leaf of male-7
SAMC476520	RNA-seq of Populus euphratica: leaf of Female-5
SAMC476519	RNA-seq of Populus euphratica: leaf of Female-4
SAMC476518	RNA-seq of Populus euphratica: leaf of Female-3
SAMC476517	RNA-seq of Populus euphratica: leaf of Female-2
SAMC476516	RNA-seq of Populus euphratica: leaf of Female-1
SAMC476515	RNA-seq of Populus euphratica: flower of male-5
SAMC476514	RNA-seq of Populus euphratica: flower of male-4
SAMC476513	RNA-seq of Populus euphratica: flower of male-3
SAMC476512	RNA-seq of Populus euphratica: flower of male-2
SAMC476511	RNA-seq of Populus euphratica: flower of male-7
SAMC476510	RNA-seq of Populus euphratica: flower of Female-5
SAMC476509	RNA-seq of Populus euphratica: flower of Female-4
SAMC476508	RNA-seq of Populus euphratica: flower of Female-3
SAMC476507	RNA-seq of Populus euphratica: flower of Female-2
SAMC476506	RNA-seq of Populus euphratica: flower of Female-1
SAMC467235	Pool-seq of Populus euphriatca: bulks of 96 male invididuals
SAMC467234	Pool-seq of Populus euphriatca: bulks of 100 female invididuals
SAMC467233	Male Genome sequencing: leaf of male Populus euphratica TM7
SAMC467232	Female Genome sequencing: leaf of female Populus euphratica TF1-136
GSA (5)	-
CRA005199	Genome sequencing on female Populus euphratica
CRA005200	Genome sequencing on male Populus euphratica
CRA005312	Epigenetic sexual dimorphism for Populus euphratica
CRA005303	Transcriptomic sexual dimorphism for Popuulus euphratica
CRA005201	BSA sequencing on female and male Populus euphratica