| Accession |
PRJCA010498 |
| Title |
Spatial Transcriptomics for developing mouse brain |
| Relevance |
Model organism |
| Data types |
Exome
Transcriptome or Gene expression
|
| Organisms |
Mus musculus
|
| Description |
Here, we collected mouse brains at embryonic days E13.5, E15.5, E16.5, E17.5 and neonatal day P0 from wild-type C57 stain. The spatial transcriptomics libraries were constructed by using 10X Genomics VIsium Spatial Gene Expression Reagent kit, and the Nova-seq PE150 platform was used for sequencing. Two biological replicates were performed for E13.5, E15.5 and E16.5, and two technical replicates were performed for E17.5 and P0. The uploaded data include the raw sequencing reads and corresponding hematoxylin & eosin stain (H&E) images. |
| Sample scope |
Monoisolate |
| Release date |
2022-11-27 |
| Publication |
| PubMed ID |
Article title |
Journal name |
DOI |
Year |
| 37500639
|
The spatiotemporal dynamics of spatially variable genes in developing mouse brain revealed by a novel computational scheme
|
Cell Death Discovery
|
10.1038/s41420-023-01569-w
|
2023
|
|
|
Spatially tuneable multi-omics sequencing using light-driven combinatorial barcoding of molecules in tissues
|
bioRxiv
|
10.1101/2024.05.20.595040
|
2024
|
|
|
| Grants |
| Agency |
program |
Grant ID |
Grant title |
| National Natural Science Foundation of China (NSFC)
|
|
32170662
|
|
|
|
| Submitter |
Cheng
Peng (chengpeng@ynu.edu.cn)
|
| Organization |
Yunnan University |
| Submission date |
2022-07-12 |
