| 项目编号 | PRJCA017452 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| 项目标题 | Droplet-based high-throughput single microbe RNA sequencing by smRandom-seq | ||||||||||
| 涉及领域 | Medical | ||||||||||
| 数据类型 | Single cell sequencing | ||||||||||
| 物种名称 |
Acinetobacter baumannii
Escherichia coli Pseudomonas aeruginosa Klebsiella pneumoniae Staphylococcus aureus |
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| 描述信息 | we report a droplet-based high-throughput single-microbe RNA-seq assay (smRandom-seq), using random primers for in situ cDNA generation, droplets for single microbe barcoding, and CRISPR-based rRNA depletion for mRNA enrichment. | ||||||||||
| 样品范围 | Multispecies | ||||||||||
| 发布日期 | 2023-06-30 | ||||||||||
| 出版信息 |
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| 项目资金来源 |
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| 提交者 | Yongcheng Wang (yongcheng@zju.edu.cn) | ||||||||||
| 提交单位 | First Affiliated Hospital, Zhejiang University | ||||||||||
| 提交日期 | 2023-06-03 |
| 资源名称 | 描述 |
|---|---|
| BioSample (5) | - |
| SAMC1275472 | Sau |
| SAMC1275471 | Pae |
| SAMC1275470 | Kpn |
| SAMC1275469 | Aba |
| SAMC1275468 | Eco |
| GSA (1) | - |
| CRA011274 | Droplet-based high-throughput single microbe RNA sequencing by smRandom-seq |